Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 C1GALT1P3-201ENST00000522049 819 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 PDCL2P2-201ENST00000533651 189 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC006518.1-201ENST00000541449 943 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 MTND4P33-201ENST00000556706 766 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC087465.1-201ENST00000560574 245 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC105224.1-201ENST00000587055 421 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC106900.2-201ENST00000604994 317 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AL592436.1-201ENST00000605135 558 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AL590099.1-201ENST00000615276 138 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AL138880.2-201ENST00000616214 239 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 U7.8-201ENST00000619968 63 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC006111.3-201ENST00000622137 383 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 RPS4XP5-202ENST00000449995 1334 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC005832.2-201ENST00000538921 1430 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 MTCO1P9-201ENST00000505577 1534 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 AC008568.2-201ENST00000623862 2313 ntBASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01561Q8N1V8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC103988.1-201ENST00000566382 2177 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 MTCO1P11-201ENST00000429111 1528 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC131971.1-201ENST00000332881 1482 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 ANAPC10P1-201ENST00000395991 556 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AL133270.1-201ENST00000402635 279 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 RPS3AP24-201ENST00000407896 734 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 MIR1251-201ENST00000408552 70 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 SNRPFP1-201ENST00000414761 252 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 Z97055.1-201ENST00000419730 712 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 TMEM167AP1-201ENST00000423409 219 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC234781.2-201ENST00000426370 994 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 RPL12P3-201ENST00000440080 396 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC002381.1-201ENST00000447049 280 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AL590664.1-201ENST00000448065 339 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 RPS3AP53-201ENST00000454716 778 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 U3.44-201ENST00000458938 192 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 SNORD11.1-201ENST00000459482 85 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 MEMO1P3-201ENST00000459811 302 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 HMGN2P13-201ENST00000476476 274 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 RPL31P61-201ENST00000496160 376 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 CBX3P3-201ENST00000508108 532 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 FABP5P12-201ENST00000515543 389 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 SNORA31.1-201ENST00000515993 133 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 SNORA31.5-201ENST00000516190 133 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 RNU6-150P-201ENST00000516237 95 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 RNA5SP143-201ENST00000516936 115 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 NARSP2-201ENST00000518524 679 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 MTND2P32-201ENST00000521584 1038 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 OR8G5-201ENST00000524943 1041 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC023050.2-201ENST00000544968 387 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 GNRHR2P1-201ENST00000555315 631 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 OR4K8P-201ENST00000578842 1048 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC012417.1-201ENST00000582307 1039 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC008962.1-201ENST00000605729 304 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC007349.4-201ENST00000608114 532 ntBASIC2.8□□□□□ -1.96
LINC01561Q8N1V8 AC012409.3-201ENST00000611343 981 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms