Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 OR52B3P-201ENST00000314715 928 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 MIR335-201ENST00000362173 94 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 Y_RNA.84-201ENST00000363011 104 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 RNY1P16-201ENST00000363063 111 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 RNU6-596P-201ENST00000365395 98 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 RNU6-611P-201ENST00000384276 104 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 MIR625-201ENST00000385047 85 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 SNORD58.1-201ENST00000391313 66 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 UBE2FP1-201ENST00000416536 447 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 UBE2D3P2-201ENST00000424409 445 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL031736.2-201ENST00000426573 787 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL591704.1-201ENST00000432574 275 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC013470.1-201ENST00000453438 462 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 RNU7-138P-201ENST00000459479 64 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AOX3P-204ENST00000491025 2107 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC110792.1-201ENST00000491826 472 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 SNRPCP11-201ENST00000492453 205 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 RN7SL612P-201ENST00000497704 295 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 CDH12P4-201ENST00000517835 295 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 CDH12P3-201ENST00000517935 295 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 CDH12P1-201ENST00000518435 295 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC109329.1-201ENST00000518744 317 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 CYCSP25-201ENST00000525280 316 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 CBX3P8-201ENST00000532412 525 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC092470.1-201ENST00000546187 132 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL355877.2-201ENST00000603670 358 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC005191.1-201ENST00000603950 358 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC025588.3-201ENST00000604182 274 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AL161616.1-201ENST00000611867 286 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 SNHG22-203ENST00000617833 660 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 DDX18P3-201ENST00000404856 2007 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 AC092070.2-203ENST00000598377 3644 ntBASIC5.91□□□□□ -1.46
CCDC116Q8IYX3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AL353796.1-201ENST00000561542 3241 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC010266.2-201ENST00000564741 3255 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 Y_RNA.183-201ENST00000363882 113 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 Y_RNA.200-201ENST00000364018 102 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 Y_RNA.237-201ENST00000364439 102 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 SNORA70H-201ENST00000383910 135 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 SNORA70J-201ENST00000384182 135 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 RNU6-754P-201ENST00000391166 107 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AL133260.1-201ENST00000405720 405 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 OSTCP4-201ENST00000424397 449 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 MTCO3P29-201ENST00000432119 779 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 POU5F1P5-201ENST00000445059 658 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 CEACAMP6-201ENST00000452007 574 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC099670.1-201ENST00000455141 783 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 RANP2-201ENST00000456833 229 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 snoU13.7-201ENST00000459220 104 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC022034.3-201ENST00000471393 478 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC004453.1-201ENST00000487895 408 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 RNA5SP400-201ENST00000517155 111 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.9□□□□□ -1.46
CCDC116Q8IYX3 AC144568.1-201ENST00000520139 137 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms