Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RPS26P56-201ENST00000444468 240 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 COX6CP2-201ENST00000444980 225 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 Z99714.1-201ENST00000450463 807 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 NF1P3-201ENST00000457709 450 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 RPS4XP13-201ENST00000483219 789 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 RPL31P13-201ENST00000484151 370 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AC034268.2-201ENST00000571784 482 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 U3.45-201ENST00000607547 219 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 AL591516.1-201ENST00000611326 274 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 PABPC1P7-201ENST00000413177 1513 ntBASIC3.39□□□□□ -1.87
CCDC50Q8IVM0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 OR1L1-202ENST00000373686 1083 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RNU6-629P-201ENST00000384061 103 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RNA5SP229-201ENST00000410809 99 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 UBE2V1P9-201ENST00000414760 368 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC245052.5-201ENST00000416320 649 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RPS3AP9-201ENST00000417027 792 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC234064.1-201ENST00000436312 247 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 ATP5C1P1-201ENST00000441945 895 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RPL21P133-201ENST00000443666 476 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RPS26P21-201ENST00000475397 348 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RPL23AP55-201ENST00000498163 452 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RN7SKP244-201ENST00000516513 307 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC092470.1-201ENST00000546187 132 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AL136520.1-202ENST00000555494 763 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 BNIP3P5-201ENST00000562290 498 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 BPTFP1-201ENST00000579209 492 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC124283.4-201ENST00000581815 456 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 SNRPGP15-201ENST00000600149 222 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC016877.3-201ENST00000606778 504 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 AC098679.5-201ENST00000624394 571 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 ZNF37BP-203ENST00000452306 1352 ntBASIC3.38□□□□□ -1.87
CCDC50Q8IVM0 FAM35CP-201ENST00000554755 2470 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 RNU6-600P-201ENST00000362524 99 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 RNA5SP119-201ENST00000362715 117 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 RNU1-85P-201ENST00000364127 164 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 SNORA46-201ENST00000384762 135 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 MIR607-201ENST00000385241 96 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 RPL5P18-201ENST00000406671 891 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 RPL31P2-201ENST00000413849 377 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 OR1AA1P-201ENST00000419597 916 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 RPL7P46-201ENST00000425129 740 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AL512637.2-201ENST00000431287 1256 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 ST13P14-201ENST00000474095 734 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC021678.1-201ENST00000505195 936 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 MTCO3P44-201ENST00000510977 541 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 SAP18P1-201ENST00000512058 390 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms