Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC008083.2-201ENST00000546707 476 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 AL121594.4-201ENST00000556211 1196 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 H3F3AP1-201ENST00000559984 334 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 SNORD84-203ENST00000584275 78 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 AL160281.1-201ENST00000605307 311 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 RPL23AP88-201ENST00000605759 454 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.58□□□□□ -2
LRRC28Q86X40 AC091046.2-201ENST00000620775 665 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.58□□□□□ -2
LRRC28Q86X40 AC009487.2-201ENST00000420969 6821 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.58□□□□□ -2
LRRC28Q86X40 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.58□□□□□ -2
LRRC28Q86X40 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.58□□□□□ -2
LRRC28Q86X40 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.57□□□□□ -2
LRRC28Q86X40 MIR22-201ENST00000362190 85 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 MIR181A2-201ENST00000384863 110 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 U3.42-201ENST00000408746 214 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.57□□□□□ -2
LRRC28Q86X40 AC244098.2-201ENST00000422068 99 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.57□□□□□ -2
LRRC28Q86X40 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.57□□□□□ -2
LRRC28Q86X40 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.57□□□□□ -2
LRRC28Q86X40 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.57□□□□□ -2
LRRC28Q86X40 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.57□□□□□ -2
LRRC28Q86X40 AIG1P1-201ENST00000503376 148 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LRRC28Q86X40 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.57□□□□□ -2
LRRC28Q86X40 SNORA9.3-201ENST00000516383 129 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.57□□□□□ -2
LRRC28Q86X40 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.57□□□□□ -2
LRRC28Q86X40 AC090695.1-201ENST00000561269 1222 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LRRC28Q86X40 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.57□□□□□ -2
LRRC28Q86X40 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.57□□□□□ -2
LRRC28Q86X40 AC135507.2-201ENST00000612443 309 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 AC007318.2-201ENST00000620999 243 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.57□□□□□ -2
LRRC28Q86X40 AL161431.1-201ENST00000618966 4205 ntBASIC2.57□□□□□ -2
LRRC28Q86X40 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.57□□□□□ -2
LRRC28Q86X40 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.57□□□□□ -2
LRRC28Q86X40 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC116096.1-201ENST00000566804 2314 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 VTRNA1-1-201ENST00000363120 99 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 SNORD56.5-201ENST00000364281 72 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 RNU1-140P-201ENST00000365040 165 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 DEFB109C-201ENST00000382575 264 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 DEFB109B-201ENST00000382656 264 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AL355379.1-201ENST00000405542 640 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AC096664.2-201ENST00000411843 406 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 USP9YP36-201ENST00000424581 829 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC091390.3-201ENST00000426478 338 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC011242.1-201ENST00000433596 1158 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC011825.1-201ENST00000484967 388 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 MTCO3P35-201ENST00000485582 781 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AC016550.3-201ENST00000515706 767 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 RN7SKP272-201ENST00000516988 232 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.56□□□□□ -2
LRRC28Q86X40 AL121603.1-201ENST00000553815 142 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 DUXAP4-201ENST00000603046 613 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 HMGB1P51-201ENST00000605166 638 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 AL162574.2-201ENST00000614618 657 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.56□□□□□ -2
LRRC28Q86X40 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRRC28Q86X40 FRG1DP-201ENST00000635586 771 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 MIR4496-201ENST00000635896 61 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AC090897.3-201ENST00000636973 1157 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 AC233263.6-201ENST00000631132 1963 ntBASIC2.56□□□□□ -2
LRRC28Q86X40 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
LRRC28Q86X40 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LRRC28Q86X40 GNG5P1-201ENST00000255500 204 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.55□□□□□ -2
LRRC28Q86X40 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 RNU6-50P-201ENST00000362356 103 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 RNU6-618P-201ENST00000363518 112 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 RNU6-335P-201ENST00000364563 113 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 CD24P4-201ENST00000382840 243 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 MIR23A-201ENST00000385245 73 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 SNORD67-201ENST00000390833 111 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 SNORA11C-201ENST00000408532 129 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms