Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 OR5AQ1P-201ENST00000527596 927 ntBASIC1.53□□□□□ -2.16
LINC00643Q86TS7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 OR11H5P-201ENST00000554039 926 ntBASIC1.53□□□□□ -2.16
LINC00643Q86TS7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 MIR3614-201ENST00000581261 86 ntBASIC1.53□□□□□ -2.16
LINC00643Q86TS7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 UBL5P2-201ENST00000583788 219 ntBASIC1.53□□□□□ -2.16
LINC00643Q86TS7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 AL356280.1-201ENST00000603614 379 ntBASIC1.53□□□□□ -2.16
LINC00643Q86TS7 ARF4P1-201ENST00000605447 541 ntBASIC1.53□□□□□ -2.16
LINC00643Q86TS7 AL162574.2-201ENST00000614618 657 ntBASIC1.53□□□□□ -2.16
LINC00643Q86TS7 MIR6774-201ENST00000614651 70 ntBASIC1.53□□□□□ -2.16
LINC00643Q86TS7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC00643Q86TS7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 MIR21-201ENST00000362134 72 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 SNORA46.1-201ENST00000391069 153 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AL445529.1-201ENST00000398713 389 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AC063979.1-201ENST00000415539 377 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 BX842559.1-201ENST00000419615 532 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AL035423.1-201ENST00000420331 213 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 RPS24P8-201ENST00000431490 402 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AC093156.1-201ENST00000440382 670 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AC008280.2-201ENST00000455473 307 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 RN7SL863P-201ENST00000462370 296 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AC090453.1-201ENST00000495560 436 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 KLRA1P-201ENST00000503499 986 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 OR5B10P-201ENST00000532869 642 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 MIR3935-201ENST00000583472 104 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AC008749.1-201ENST00000597650 306 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 VN1R81P-201ENST00000602085 372 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 AC011472.4-201ENST00000615848 491 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.52□□□□□ -2.17
LINC00643Q86TS7 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.52□□□□□ -2.17
LINC00643Q86TS7 MTND4P35-201ENST00000604257 1375 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 RNU6-629P-201ENST00000384061 103 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 MIR320B1-201ENST00000390209 79 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 USP9YP20-201ENST00000419224 558 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 USP9YP9-201ENST00000429406 715 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AL451074.3-201ENST00000437709 472 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AL157827.1-201ENST00000447622 132 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC233279.1-201ENST00000455300 423 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 TRBV26-201ENST00000456572 344 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 snoU13.24-201ENST00000458998 104 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 RPL27AP5-201ENST00000469428 449 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC109925.1-201ENST00000478069 331 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 TPT1P3-201ENST00000492841 512 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 MTCO2P9-201ENST00000503214 694 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC010460.1-201ENST00000507087 466 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 MTCO3P44-201ENST00000510977 541 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 RNA5SP282-201ENST00000516355 108 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 SNORA74D-201ENST00000516404 141 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC093014.1-201ENST00000548926 724 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 MIR6736-201ENST00000616799 59 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC018692.3-201ENST00000623929 123 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AC110079.1-202ENST00000635213 138 ntBASIC1.51□□□□□ -2.17
LINC00643Q86TS7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms