Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 PHKBP1-201ENST00000450951 1951 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 SNORA68.2-201ENST00000391263 128 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC007064.1-201ENST00000412238 351 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC133473.1-201ENST00000455173 299 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC067747.1-201ENST00000608026 250 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC005046.1-201ENST00000608515 625 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 GABPAP-201ENST00000419271 1356 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AC097714.1-201ENST00000511272 1647 ntBASIC1.71□□□□□ -2.14
CSMD3Q7Z407 AL445213.1-201ENST00000412589 747 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC091544.1-201ENST00000484702 348 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC107222.1-201ENST00000510899 637 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 SNORA64.4-201ENST00000516632 81 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC023813.4-201ENST00000607580 580 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC069528.2-201ENST00000624849 1991 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 NPM1P10-201ENST00000398310 865 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 RNA5SP107-201ENST00000411358 122 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 NIPA2P2-201ENST00000496376 1083 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC026436.1-201ENST00000510537 270 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 OR8L1P-201ENST00000534005 955 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC020895.1-201ENST00000595362 272 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 RPL23AP48-201ENST00000406913 488 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 RN7SKP285-201ENST00000410137 318 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC245291.1-201ENST00000419501 328 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC006539.3-201ENST00000454258 129 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 DYNLL1P6-201ENST00000503440 264 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 RN7SKP43-201ENST00000516173 320 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 RNU6-1231P-201ENST00000517185 103 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC018630.1-201ENST00000541376 925 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC011611.5-201ENST00000552477 578 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC011494.1-201ENST00000596454 237 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AC010329.2-201ENST00000595195 2737 ntBASIC1.7□□□□□ -2.14
CSMD3Q7Z407 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CSMD3Q7Z407 AL138820.1-201ENST00000617901 5305 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 RNU6-249P-201ENST00000363016 102 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 SPA17P1-201ENST00000416656 452 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 FGF7P3-201ENST00000454645 303 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 MIR6779-201ENST00000617283 64 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AL591416.1-201ENST00000404015 867 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 USP9YP20-201ENST00000419224 558 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 SETP10-201ENST00000424368 814 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AL592437.1-201ENST00000443781 492 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AL450326.2-201ENST00000421913 1962 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AL590004.2-201ENST00000404787 371 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 RNA5SP270-201ENST00000411361 118 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AP004217.1-201ENST00000480579 346 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 RNU6-295P-201ENST00000516901 104 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 AC010338.1-201ENST00000621823 717 ntBASIC1.69□□□□□ -2.14
CSMD3Q7Z407 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
CSMD3Q7Z407 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AL139156.1-201ENST00000412785 841 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 FAM60DP-201ENST00000524174 632 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 MIR4635-201ENST00000583759 79 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CSMD3Q7Z407 BX005019.1-201ENST00000561881 1810 ntBASIC1.68□□□□□ -2.14
CSMD3Q7Z407 RPL9P7-201ENST00000330965 580 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms