Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AL109913.1-201ENST00000421173 514 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AL356387.2-201ENST00000422272 243 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.03□□□□□ -1.6
KRT40Q6A162 PGBD4P3-201ENST00000440731 581 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC013267.1-201ENST00000458227 267 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC079804.1-201ENST00000461922 436 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 RPS3AP17-201ENST00000472594 777 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC013828.1-201ENST00000481845 158 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 RPL7P24-201ENST00000493052 752 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AP002812.1-201ENST00000495378 474 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC114981.1-201ENST00000503897 678 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 RNU6-528P-201ENST00000516926 100 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 RNU6-430P-201ENST00000517078 107 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC090502.2-201ENST00000549267 280 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AL389895.1-201ENST00000554127 252 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC006960.3-201ENST00000561845 705 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.03□□□□□ -1.6
KRT40Q6A162 RN7SL176P-201ENST00000580352 264 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC012417.1-201ENST00000582307 1039 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC115085.1-201ENST00000588924 229 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC024220.1-201ENST00000603675 484 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC091965.4-201ENST00000607691 587 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC091304.9-201ENST00000612091 226 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC007546.1-201ENST00000619452 559 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 MIR7154-201ENST00000620673 73 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 AL023881.1-201ENST00000621088 301 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRT40Q6A162 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRT40Q6A162 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRT40Q6A162 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.03□□□□□ -1.6
KRT40Q6A162 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
KRT40Q6A162 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRT40Q6A162 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
KRT40Q6A162 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRT40Q6A162 AP000756.2-201ENST00000624168 2567 ntBASIC5.03□□□□□ -1.6
KRT40Q6A162 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
KRT40Q6A162 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
KRT40Q6A162 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRT40Q6A162 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.02□□□□□ -1.61
KRT40Q6A162 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 AC006971.1-201ENST00000407916 4486 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 OR5P1P-201ENST00000299512 925 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 RNU1-15P-201ENST00000353977 144 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT40Q6A162 AL583835.1-201ENST00000399570 407 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 RNU2-65P-201ENST00000410162 185 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 RNA5SP44-201ENST00000410446 133 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT40Q6A162 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AC233981.1-201ENST00000423224 461 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT40Q6A162 RPL7P36-201ENST00000444633 681 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AL358232.1-201ENST00000448030 501 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT40Q6A162 USP9YP12-201ENST00000450481 570 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 ABCF2P2-201ENST00000450549 296 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 SNRPFP4-201ENST00000456366 242 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT40Q6A162 MEMO1P3-201ENST00000459811 302 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AC097493.1-201ENST00000463958 372 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AP000942.1-201ENST00000463969 747 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 RPL7P22-201ENST00000466005 733 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT40Q6A162 AC092989.1-201ENST00000481235 277 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 HMGB1P36-201ENST00000487709 576 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 RN7SL812P-201ENST00000493791 279 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KRT40Q6A162 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
KRT40Q6A162 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.02□□□□□ -1.61
KRT40Q6A162 RPS27AP18-201ENST00000515536 459 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 RNA5SP216-201ENST00000516111 123 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 RNU6-150P-201ENST00000516237 95 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AC013828.2-201ENST00000532487 235 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 AL352979.3-201ENST00000553515 247 ntBASIC5.02□□□□□ -1.61
KRT40Q6A162 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT40Q6A162 AC233702.9-201ENST00000581528 203 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms