Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 RPS12P5-201ENST00000423449 371 ntBASIC2.36□□□□□ -2.03
CACNA1EQ15878 RPL7P52-201ENST00000449200 742 ntBASIC2.36□□□□□ -2.03
CACNA1EQ15878 AC091179.1-201ENST00000461606 579 ntBASIC2.36□□□□□ -2.03
CACNA1EQ15878 RPL36AP21-201ENST00000490372 323 ntBASIC2.36□□□□□ -2.03
CACNA1EQ15878 AC147055.1-201ENST00000509261 750 ntBASIC2.36□□□□□ -2.03
CACNA1EQ15878 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.36□□□□□ -2.03
CACNA1EQ15878 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1EQ15878 AC083760.1-201ENST00000589621 670 ntBASIC2.36□□□□□ -2.03
CACNA1EQ15878 AC025946.2-201ENST00000603398 234 ntBASIC2.36□□□□□ -2.03
CACNA1EQ15878 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.36□□□□□ -2.03
CACNA1EQ15878 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CACNA1EQ15878 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CACNA1EQ15878 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 Y_RNA.355-201ENST00000365462 98 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 SNORA70E-201ENST00000384492 135 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 SNORA17.3-201ENST00000391159 129 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 AL024474.1-201ENST00000404655 591 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 AL450263.2-201ENST00000439400 589 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 RPL30P9-201ENST00000465586 330 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 RPL23AP70-201ENST00000483361 460 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 AL109741.3-201ENST00000561748 592 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 MIR4498-201ENST00000577599 66 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 AC010680.4-201ENST00000605334 543 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 MIR6873-201ENST00000622788 63 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CACNA1EQ15878 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CACNA1EQ15878 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 AL450326.2-201ENST00000421913 1962 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 AL592045.1-201ENST00000429867 352 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 AC096638.1-201ENST00000444678 216 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 HMGB1P48-201ENST00000446155 598 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 MTCO3P11-201ENST00000455103 774 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 GAPDHP39-201ENST00000481866 979 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 RPL36AP51-201ENST00000487216 318 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 OR9N1P-201ENST00000491296 333 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CACNA1EQ15878 SEC11B-201ENST00000518383 499 ntBASIC2.35□□□□□ -2.03
CACNA1EQ15878 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.35□□□□□ -2.03
CACNA1EQ15878 MIR708-201ENST00000390708 88 ntBASIC2.34□□□□□ -2.03
CACNA1EQ15878 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.34□□□□□ -2.03
CACNA1EQ15878 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.34□□□□□ -2.03
CACNA1EQ15878 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CACNA1EQ15878 AC119751.1-201ENST00000513357 765 ntBASIC2.34□□□□□ -2.03
CACNA1EQ15878 NRBF2P1-201ENST00000587407 859 ntBASIC2.34□□□□□ -2.03
CACNA1EQ15878 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CACNA1EQ15878 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CACNA1EQ15878 RN7SKP140-201ENST00000411196 284 ntBASIC2.34□□□□□ -2.04
CACNA1EQ15878 AC234781.4-201ENST00000419384 244 ntBASIC2.34□□□□□ -2.04
CACNA1EQ15878 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.34□□□□□ -2.04
CACNA1EQ15878 AC108729.3-201ENST00000513484 108 ntBASIC2.34□□□□□ -2.04
CACNA1EQ15878 AC021269.2-201ENST00000532318 330 ntBASIC2.34□□□□□ -2.04
CACNA1EQ15878 NPM1P35-201ENST00000533043 868 ntBASIC2.34□□□□□ -2.04
CACNA1EQ15878 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.34□□□□□ -2.04
CACNA1EQ15878 AC110741.2-201ENST00000605278 268 ntBASIC2.34□□□□□ -2.04
CACNA1EQ15878 RNU6-84P-201ENST00000607737 102 ntBASIC2.34□□□□□ -2.04
CACNA1EQ15878 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1EQ15878 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1EQ15878 Y_RNA.338-201ENST00000365320 114 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1EQ15878 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 RNU2-6P-201ENST00000411404 190 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 TRIM60P18-201ENST00000441518 828 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 RNA5SP210-201ENST00000391034 120 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 AL158825.1-201ENST00000414735 521 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 AC073136.2-201ENST00000417282 849 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1EQ15878 AC105137.2-201ENST00000569073 466 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 AL136981.2-201ENST00000617319 734 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1EQ15878 NSRP1P1-201ENST00000444067 1693 ntBASIC2.33□□□□□ -2.04
CACNA1EQ15878 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.32□□□□□ -2.04
CACNA1EQ15878 AC097714.1-201ENST00000511272 1647 ntBASIC2.32□□□□□ -2.04
CACNA1EQ15878 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.32□□□□□ -2.04
CACNA1EQ15878 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CACNA1EQ15878 OR5AQ1P-202ENST00000641257 1534 ntBASIC2.32□□□□□ -2.04
CACNA1EQ15878 RPL23AP48-201ENST00000406913 488 ntBASIC2.32□□□□□ -2.04
CACNA1EQ15878 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC2.32□□□□□ -2.04
CACNA1EQ15878 AC010881.1-201ENST00000433830 235 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms