Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 BX276092.3-201ENST00000424182 230 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 AL139415.2-201ENST00000431968 163 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 RPS27P5-201ENST00000444247 244 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TFF3Q07654 RPL23AP23-201ENST00000452590 471 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 AP000705.1-201ENST00000454567 350 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 OR4A45P-201ENST00000529954 901 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.21□□□□□ -2.06
TFF3Q07654 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.21□□□□□ -2.06
TFF3Q07654 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.21□□□□□ -2.06
TFF3Q07654 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.21□□□□□ -2.06
TFF3Q07654 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.21□□□□□ -2.06
TFF3Q07654 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.21□□□□□ -2.06
TFF3Q07654 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.21□□□□□ -2.06
TFF3Q07654 AC007938.3-201ENST00000604965 623 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 AC068722.2-201ENST00000618734 544 ntBASIC2.21□□□□□ -2.06
TFF3Q07654 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
TFF3Q07654 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
TFF3Q07654 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TFF3Q07654 AC006378.2-201ENST00000623178 2476 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.2□□□□□ -2.06
TFF3Q07654 AL355578.1-201ENST00000607405 1328 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 AC006020.1-201ENST00000420179 1854 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TFF3Q07654 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TFF3Q07654 RNU6-178P-201ENST00000384631 104 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 AL359511.1-201ENST00000402970 211 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 USP9YP20-201ENST00000419224 558 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 AC003685.2-201ENST00000422795 395 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 AL034379.1-201ENST00000423216 253 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 FCF1P1-201ENST00000432690 571 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.2□□□□□ -2.06
TFF3Q07654 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.2□□□□□ -2.06
TFF3Q07654 ST13P20-201ENST00000447996 1065 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.2□□□□□ -2.06
TFF3Q07654 Y_RNA.638-201ENST00000459374 113 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TFF3Q07654 RN7SL636P-201ENST00000497504 294 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 TBCAP3-201ENST00000512475 312 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 AC100870.1-201ENST00000522035 505 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TFF3Q07654 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
TFF3Q07654 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.2□□□□□ -2.06
TFF3Q07654 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.2□□□□□ -2.06
TFF3Q07654 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.2□□□□□ -2.06
TFF3Q07654 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TFF3Q07654 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TFF3Q07654 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TFF3Q07654 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TFF3Q07654 MTCO1P14-201ENST00000441695 1559 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
TFF3Q07654 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TFF3Q07654 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TFF3Q07654 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.19□□□□□ -2.06
TFF3Q07654 AL513175.2-201ENST00000422071 443 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 AL356320.1-201ENST00000429616 163 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 ZYG11AP1-201ENST00000430329 837 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
TFF3Q07654 FAM103A2P-201ENST00000444122 354 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 HIGD1AP2-201ENST00000446367 280 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.19□□□□□ -2.06
TFF3Q07654 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.19□□□□□ -2.06
TFF3Q07654 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC2.19□□□□□ -2.06
TFF3Q07654 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.19□□□□□ -2.06
TFF3Q07654 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.19□□□□□ -2.06
TFF3Q07654 AC004486.1-201ENST00000546846 233 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.19□□□□□ -2.06
TFF3Q07654 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.19□□□□□ -2.06
TFF3Q07654 AC078899.3-201ENST00000599065 212 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 BDH2P1-201ENST00000602288 736 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 AP002967.1-201ENST00000624203 539 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 FAM35CP-201ENST00000554755 2470 ntBASIC2.19□□□□□ -2.06
TFF3Q07654 AP001148.1-201ENST00000624124 2359 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TFF3Q07654 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.18□□□□□ -2.06
TFF3Q07654 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
TFF3Q07654 RNU1-100P-201ENST00000365255 165 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.18□□□□□ -2.06
TFF3Q07654 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TFF3Q07654 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TFF3Q07654 MTCO1P39-201ENST00000426148 480 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 HMGB3P12-201ENST00000438745 556 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.18□□□□□ -2.06
TFF3Q07654 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.18□□□□□ -2.06
TFF3Q07654 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.18□□□□□ -2.06
TFF3Q07654 RPL9P32-201ENST00000464118 620 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.18□□□□□ -2.06
TFF3Q07654 AP001086.1-201ENST00000494882 321 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.18□□□□□ -2.06
TFF3Q07654 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.18□□□□□ -2.06
TFF3Q07654 AC234781.5-201ENST00000508429 271 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC008837.1-201ENST00000511513 412 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC108471.1-201ENST00000513977 287 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC104986.1-201ENST00000517978 436 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC128657.1-201ENST00000549459 145 ntBASIC2.18□□□□□ -2.06
TFF3Q07654 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.18□□□□□ -2.06
TFF3Q07654 MIR3670-2-201ENST00000582974 65 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms