Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AP000705.1-201ENST00000454567 350 ntBASIC3.18□□□□□ -1.9
TPM4P67936 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM4P67936 AL136126.1-201ENST00000473603 402 ntBASIC3.18□□□□□ -1.9
TPM4P67936 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM4P67936 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM4P67936 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM4P67936 AC093770.1-201ENST00000511559 571 ntBASIC3.18□□□□□ -1.9
TPM4P67936 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM4P67936 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
TPM4P67936 CIR1P1-201ENST00000524055 1133 ntBASIC3.18□□□□□ -1.9
TPM4P67936 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM4P67936 AC074029.2-201ENST00000551045 634 ntBASIC3.18□□□□□ -1.9
TPM4P67936 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 AC073387.2-201ENST00000604797 784 ntBASIC3.18□□□□□ -1.9
TPM4P67936 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.18□□□□□ -1.9
TPM4P67936 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 AL355493.4-201ENST00000618530 292 ntBASIC3.18□□□□□ -1.9
TPM4P67936 FRG1DP-201ENST00000635586 771 ntBASIC3.18□□□□□ -1.9
TPM4P67936 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
TPM4P67936 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM4P67936 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
TPM4P67936 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TPM4P67936 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TPM4P67936 AC123912.3-201ENST00000600907 1367 ntBASIC3.17□□□□□ -1.9
TPM4P67936 RNU6-837P-201ENST00000391056 108 ntBASIC3.17□□□□□ -1.9
TPM4P67936 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM4P67936 RN7SKP220-201ENST00000410611 288 ntBASIC3.17□□□□□ -1.9
TPM4P67936 AL096701.2-201ENST00000416920 238 ntBASIC3.17□□□□□ -1.9
TPM4P67936 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM4P67936 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM4P67936 AL445669.2-201ENST00000454425 421 ntBASIC3.17□□□□□ -1.9
TPM4P67936 AC091153.1-201ENST00000466297 402 ntBASIC3.17□□□□□ -1.9
TPM4P67936 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM4P67936 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.17□□□□□ -1.9
TPM4P67936 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
TPM4P67936 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM4P67936 AC023632.4-201ENST00000517783 191 ntBASIC3.17□□□□□ -1.9
TPM4P67936 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM4P67936 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM4P67936 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.17□□□□□ -1.9
TPM4P67936 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.17□□□□□ -1.9
TPM4P67936 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.17□□□□□ -1.9
TPM4P67936 AC091046.2-201ENST00000620775 665 ntBASIC3.17□□□□□ -1.9
TPM4P67936 AC006111.3-201ENST00000622137 383 ntBASIC3.17□□□□□ -1.9
TPM4P67936 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TPM4P67936 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
TPM4P67936 MTCO1P12-201ENST00000414273 1543 ntBASIC3.17□□□□□ -1.9
TPM4P67936 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TPM4P67936 AP002907.1-201ENST00000606361 1430 ntBASIC3.17□□□□□ -1.9
TPM4P67936 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
TPM4P67936 AC009501.3-201ENST00000605001 1352 ntBASIC3.16□□□□□ -1.9
TPM4P67936 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TPM4P67936 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM4P67936 AC091862.1-201ENST00000438016 1100 ntBASIC3.16□□□□□ -1.9
TPM4P67936 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
TPM4P67936 AP002345.1-201ENST00000456493 928 ntBASIC3.16□□□□□ -1.9
TPM4P67936 RN7SL542P-201ENST00000467147 294 ntBASIC3.16□□□□□ -1.9
TPM4P67936 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TPM4P67936 MTND5P4-201ENST00000514978 288 ntBASIC3.16□□□□□ -1.9
TPM4P67936 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.16□□□□□ -1.9
TPM4P67936 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM4P67936 AC139103.1-201ENST00000534696 1030 ntBASIC3.16□□□□□ -1.9
TPM4P67936 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM4P67936 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM4P67936 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM4P67936 MTCYBP28-201ENST00000566728 1132 ntBASIC3.16□□□□□ -1.9
TPM4P67936 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.16□□□□□ -1.9
TPM4P67936 MIR4697-201ENST00000582977 78 ntBASIC3.16□□□□□ -1.9
TPM4P67936 MIMT1-201ENST00000597105 1050 ntBASIC3.16□□□□□ -1.9
TPM4P67936 AC103881.1-201ENST00000603476 538 ntBASIC3.16□□□□□ -1.9
TPM4P67936 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.16□□□□□ -1.9
TPM4P67936 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM4P67936 AC022509.4-201ENST00000621404 572 ntBASIC3.16□□□□□ -1.9
TPM4P67936 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.16□□□□□ -1.9
TPM4P67936 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
TPM4P67936 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TPM4P67936 ZNF807-201ENST00000328088 1707 ntBASIC3.16□□□□□ -1.9
TPM4P67936 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TPM4P67936 PTMAP2-201ENST00000397627 327 ntBASIC3.15□□□□□ -1.91
TPM4P67936 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TPM4P67936 SSXP9-201ENST00000417503 292 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AL513175.1-201ENST00000431492 780 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AL159987.2-201ENST00000432754 307 ntBASIC3.15□□□□□ -1.91
TPM4P67936 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM4P67936 BTF3P5-201ENST00000457252 467 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AC104472.2-201ENST00000469035 601 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AC090525.1-201ENST00000479116 478 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AC103975.1-201ENST00000482506 483 ntBASIC3.15□□□□□ -1.91
TPM4P67936 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AP001025.2-201ENST00000490908 477 ntBASIC3.15□□□□□ -1.91
TPM4P67936 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM4P67936 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TPM4P67936 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.15□□□□□ -1.91
TPM4P67936 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TPM4P67936 PRELID3BP5-201ENST00000508612 460 ntBASIC3.15□□□□□ -1.91
TPM4P67936 IGKV2D-36-201ENST00000518643 226 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms