Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
YBX1P67809 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
YBX1P67809 U3.32-201ENST00000408116 212 ntBASIC5.01□□□□□ -1.61
YBX1P67809 Y_RNA.605-201ENST00000410577 105 ntBASIC5.01□□□□□ -1.61
YBX1P67809 RN7SKP126-201ENST00000411143 300 ntBASIC5.01□□□□□ -1.61
YBX1P67809 CTSL3P-202ENST00000412179 788 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.01□□□□□ -1.61
YBX1P67809 ERLEC1P1-201ENST00000433806 578 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.01□□□□□ -1.61
YBX1P67809 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.01□□□□□ -1.61
YBX1P67809 AL389915.2-201ENST00000454576 441 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AC091685.2-201ENST00000454924 864 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AL590639.1-201ENST00000456484 337 ntBASIC5.01□□□□□ -1.61
YBX1P67809 MTCO3P2-201ENST00000457365 171 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AC079168.1-201ENST00000458741 345 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.01□□□□□ -1.61
YBX1P67809 AC011005.3-201ENST00000491624 395 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AL049874.2-201ENST00000492636 288 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.01□□□□□ -1.61
YBX1P67809 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.01□□□□□ -1.61
YBX1P67809 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.01□□□□□ -1.61
YBX1P67809 AC006427.1-201ENST00000514359 712 ntBASIC5.01□□□□□ -1.61
YBX1P67809 SCARNA24.1-201ENST00000516465 137 ntBASIC5.01□□□□□ -1.61
YBX1P67809 SNORA25.17-201ENST00000517184 124 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.01□□□□□ -1.61
YBX1P67809 AP003497.1-201ENST00000528472 562 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.01□□□□□ -1.61
YBX1P67809 RN7SL708P-201ENST00000580952 299 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.01□□□□□ -1.61
YBX1P67809 POLR3GP2-201ENST00000588366 668 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.01□□□□□ -1.61
YBX1P67809 HSPE1P14-201ENST00000605812 302 ntBASIC5.01□□□□□ -1.61
YBX1P67809 AL022345.1-201ENST00000607292 135 ntBASIC5.01□□□□□ -1.61
YBX1P67809 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 AC007792.1-201ENST00000623023 402 ntBASIC5.01□□□□□ -1.61
YBX1P67809 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
YBX1P67809 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.01□□□□□ -1.61
YBX1P67809 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.01□□□□□ -1.61
YBX1P67809 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 AC023421.1-201ENST00000590535 1785 ntBASIC5.01□□□□□ -1.61
YBX1P67809 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.01□□□□□ -1.61
YBX1P67809 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.01□□□□□ -1.61
YBX1P67809 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
YBX1P67809 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
YBX1P67809 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 AL445437.1-201ENST00000623157 3087 ntBASIC5□□□□□ -1.61
YBX1P67809 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 U8.4-201ENST00000363626 134 ntBASIC5□□□□□ -1.61
YBX1P67809 Y_RNA.401-201ENST00000383965 117 ntBASIC5□□□□□ -1.61
YBX1P67809 SNORD116-29-201ENST00000384516 83 ntBASIC5□□□□□ -1.61
YBX1P67809 MIR1182-201ENST00000408363 97 ntBASIC5□□□□□ -1.61
YBX1P67809 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5□□□□□ -1.61
YBX1P67809 RNU4-26P-201ENST00000410270 107 ntBASIC5□□□□□ -1.61
YBX1P67809 AC113618.1-201ENST00000416747 285 ntBASIC5□□□□□ -1.61
YBX1P67809 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5□□□□□ -1.61
YBX1P67809 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5□□□□□ -1.61
YBX1P67809 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5□□□□□ -1.61
YBX1P67809 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5□□□□□ -1.61
YBX1P67809 AL138799.3-201ENST00000438968 350 ntBASIC5□□□□□ -1.61
YBX1P67809 RPS11P7-201ENST00000442125 465 ntBASIC5□□□□□ -1.61
YBX1P67809 DDX3P2-201ENST00000446138 111 ntBASIC5□□□□□ -1.61
YBX1P67809 TCEA1P1-201ENST00000449716 880 ntBASIC5□□□□□ -1.61
YBX1P67809 AP1S2P1-201ENST00000457344 379 ntBASIC5□□□□□ -1.61
YBX1P67809 RN7SL189P-201ENST00000468631 289 ntBASIC5□□□□□ -1.61
YBX1P67809 RN7SL808P-201ENST00000496066 299 ntBASIC5□□□□□ -1.61
YBX1P67809 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5□□□□□ -1.61
YBX1P67809 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5□□□□□ -1.61
YBX1P67809 RNU4-29P-201ENST00000515943 174 ntBASIC5□□□□□ -1.61
YBX1P67809 RNA5SP337-201ENST00000517007 109 ntBASIC5□□□□□ -1.61
YBX1P67809 AC012400.1-201ENST00000518452 381 ntBASIC5□□□□□ -1.61
YBX1P67809 NARSP2-201ENST00000518524 679 ntBASIC5□□□□□ -1.61
YBX1P67809 AC018630.1-201ENST00000541376 925 ntBASIC5□□□□□ -1.61
YBX1P67809 NCAPGP2-201ENST00000557911 754 ntBASIC5□□□□□ -1.61
YBX1P67809 AC115085.1-201ENST00000588924 229 ntBASIC5□□□□□ -1.61
YBX1P67809 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5□□□□□ -1.61
YBX1P67809 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5□□□□□ -1.61
YBX1P67809 XIAPP1-201ENST00000603162 600 ntBASIC5□□□□□ -1.61
YBX1P67809 AC011373.1-201ENST00000607270 237 ntBASIC5□□□□□ -1.61
YBX1P67809 AP005432.2-201ENST00000608162 586 ntBASIC5□□□□□ -1.61
YBX1P67809 uc_338.15-201ENST00000615470 191 ntBASIC5□□□□□ -1.61
YBX1P67809 AC091925.1-201ENST00000623204 462 ntBASIC5□□□□□ -1.61
YBX1P67809 AC138965.3-201ENST00000623875 498 ntBASIC5□□□□□ -1.61
YBX1P67809 PANDAR-201ENST00000629595 1506 ntBASIC5□□□□□ -1.61
YBX1P67809 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5□□□□□ -1.61
YBX1P67809 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5□□□□□ -1.61
YBX1P67809 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
YBX1P67809 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
YBX1P67809 AP004289.2-201ENST00000444413 1457 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms