Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.83□□□□□ -1.64
GFRA1P56159 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.83□□□□□ -1.64
GFRA1P56159 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA1P56159 MIR4703-201ENST00000577728 79 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 MIR4742-201ENST00000581069 85 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 MIR4293-201ENST00000584305 78 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AC005498.1-201ENST00000592125 465 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA1P56159 MIR1302-2-201ENST00000607096 138 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 AC133644.2-201ENST00000608142 540 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA1P56159 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA1P56159 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
GFRA1P56159 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
GFRA1P56159 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.83□□□□□ -1.64
GFRA1P56159 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA1P56159 AC011493.1-201ENST00000596753 1632 ntBASIC4.83□□□□□ -1.64
GFRA1P56159 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GFRA1P56159 MTCO1P24-201ENST00000515438 1558 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
GFRA1P56159 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA1P56159 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.82□□□□□ -1.64
GFRA1P56159 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
GFRA1P56159 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 BDP1P-201ENST00000582658 1990 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA1P56159 GABPAP-201ENST00000419271 1356 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 ASNSP1-201ENST00000518311 1939 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA1P56159 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA1P56159 AL139276.1-201ENST00000311910 1001 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 SNORA63-201ENST00000363450 132 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AL356967.1-201ENST00000406305 431 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 RNU4-34P-201ENST00000410431 124 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 RNA5SP345-201ENST00000410646 108 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 RNU6-1148P-201ENST00000410992 104 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 UBE2FP1-201ENST00000416536 447 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 ARL5AP1-201ENST00000418991 388 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.82□□□□□ -1.64
GFRA1P56159 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.82□□□□□ -1.64
GFRA1P56159 AL590399.6-201ENST00000446396 307 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AL590639.1-201ENST00000456484 337 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 SNRPFP3-201ENST00000457792 225 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AC090602.1-201ENST00000469695 252 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 RN7SL222P-201ENST00000476452 299 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AC058823.1-201ENST00000485315 474 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.82□□□□□ -1.64
GFRA1P56159 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.82□□□□□ -1.64
GFRA1P56159 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.82□□□□□ -1.64
GFRA1P56159 AC112206.3-201ENST00000514578 389 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AC026801.2-201ENST00000515352 425 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 RNU6-1092P-201ENST00000516955 87 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 RN7SKP256-201ENST00000517201 314 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 DEFB109D-201ENST00000529497 240 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.82□□□□□ -1.64
GFRA1P56159 AC068446.3-201ENST00000555285 382 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.82□□□□□ -1.64
GFRA1P56159 AC010928.3-201ENST00000587712 541 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA1P56159 AL022394.1-201ENST00000606979 292 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AC126915.2-201ENST00000610957 190 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 AL160413.1-201ENST00000622780 310 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.82□□□□□ -1.64
GFRA1P56159 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA1P56159 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
GFRA1P56159 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
GFRA1P56159 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.82□□□□□ -1.64
GFRA1P56159 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
GFRA1P56159 BCORP1-203ENST00000513194 5093 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GFRA1P56159 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.82□□□□□ -1.64
GFRA1P56159 DDX10P1-201ENST00000448545 1933 ntBASIC4.82□□□□□ -1.64
GFRA1P56159 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 C4BPAP1-201ENST00000415474 1893 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.81□□□□□ -1.64
GFRA1P56159 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
GFRA1P56159 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GFRA1P56159 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.81□□□□□ -1.64
GFRA1P56159 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GFRA1P56159 Y_RNA.58-201ENST00000362807 102 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 Y_RNA.154-201ENST00000363624 102 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 RNU6-1284P-201ENST00000363701 100 ntBASIC4.81□□□□□ -1.64
GFRA1P56159 RNY3P1-201ENST00000365085 102 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms