Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC010733.2-201ENST00000589496 5702 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK2P53671 RNU6-582P-201ENST00000362989 107 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 Y_RNA.333-201ENST00000365274 102 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 RNU6-921P-201ENST00000384361 107 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 Y_RNA.578-201ENST00000390903 88 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 SSXP10-201ENST00000402595 565 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AL136116.1-201ENST00000403591 381 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 RNU4-22P-201ENST00000411058 166 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 MTND4P22-201ENST00000413116 1169 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 RPS29P4-201ENST00000414733 161 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC107081.1-201ENST00000414975 361 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 GTF2IP3-201ENST00000433887 494 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 HSPD1P21-201ENST00000436541 245 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AL590399.6-201ENST00000446396 307 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 ZNF886P-201ENST00000450781 723 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 NDUFA5P7-201ENST00000452914 242 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 PRSS3P4-201ENST00000453323 162 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 ANP32BP2-201ENST00000454525 545 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC078817.1-201ENST00000492623 435 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 RPL5P23-201ENST00000496040 868 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 RPL21P131-201ENST00000497298 483 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 RNU6-885P-201ENST00000516607 104 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 RNU6-579P-201ENST00000516879 102 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 AP006245.1-201ENST00000522549 120 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 AC009097.3-201ENST00000563557 1018 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 AP003973.1-201ENST00000604639 691 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AL034351.1-201ENST00000605288 668 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 AC093783.1-201ENST00000612976 329 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK2P53671 AP003485.2-201ENST00000623636 610 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 AC098679.5-201ENST00000624394 571 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK2P53671 PABPC1P7-201ENST00000413177 1513 ntBASIC3.63□□□□□ -1.83
LIMK2P53671 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LIMK2P53671 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK2P53671 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.63□□□□□ -1.83
LIMK2P53671 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.63□□□□□ -1.83
LIMK2P53671 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LIMK2P53671 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.63□□□□□ -1.83
LIMK2P53671 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK2P53671 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK2P53671 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK2P53671 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.62□□□□□ -1.83
LIMK2P53671 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
LIMK2P53671 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
LIMK2P53671 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LIMK2P53671 RNA5SP51-201ENST00000364750 119 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 RNA5SP235-201ENST00000365411 114 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK2P53671 RNU6-1226P-201ENST00000384317 107 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 RNY3P9-201ENST00000384727 106 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 MIR217-201ENST00000384817 110 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 MIR649-201ENST00000384843 97 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK2P53671 AL079342.2-201ENST00000403367 482 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.62□□□□□ -1.83
LIMK2P53671 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.62□□□□□ -1.83
LIMK2P53671 AL159169.1-201ENST00000421119 127 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.62□□□□□ -1.83
LIMK2P53671 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.62□□□□□ -1.83
LIMK2P53671 SDCBPP2-201ENST00000424643 885 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 C1DP1-201ENST00000426049 402 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 AC010655.1-201ENST00000449336 292 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK2P53671 AC084357.1-201ENST00000473404 255 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK2P53671 FCF1P3-201ENST00000496394 590 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 ARL2BPP6-201ENST00000512757 439 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK2P53671 RNA5SP309-201ENST00000516670 106 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 MRPS36P3-201ENST00000519284 130 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 ARL2BPP5-201ENST00000523141 481 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.62□□□□□ -1.83
LIMK2P53671 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LIMK2P53671 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.62□□□□□ -1.83
LIMK2P53671 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
LIMK2P53671 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.62□□□□□ -1.83
LIMK2P53671 AC093519.1-201ENST00000566109 298 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.62□□□□□ -1.83
LIMK2P53671 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.62□□□□□ -1.83
LIMK2P53671 BNIP3P24-201ENST00000593398 557 ntBASIC3.62□□□□□ -1.83
LIMK2P53671 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms