Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPAP53621 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.52□□□□□ -1.69
COPAP53621 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.52□□□□□ -1.69
COPAP53621 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPAP53621 MTND5P3-201ENST00000438536 1800 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC008033.1-201ENST00000216407 1162 ntBASIC4.52□□□□□ -1.69
COPAP53621 OR5P1P-201ENST00000299512 925 ntBASIC4.52□□□□□ -1.69
COPAP53621 MIR448-201ENST00000362131 111 ntBASIC4.52□□□□□ -1.69
COPAP53621 RNU6-777P-201ENST00000364265 104 ntBASIC4.52□□□□□ -1.69
COPAP53621 RNU4-75P-201ENST00000364621 146 ntBASIC4.52□□□□□ -1.69
COPAP53621 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 AC109780.2-201ENST00000413467 845 ntBASIC4.52□□□□□ -1.69
COPAP53621 SNRPFP1-201ENST00000414761 252 ntBASIC4.52□□□□□ -1.69
COPAP53621 AL031779.1-201ENST00000415663 330 ntBASIC4.52□□□□□ -1.69
COPAP53621 RAD23BP1-201ENST00000421404 1227 ntBASIC4.52□□□□□ -1.69
COPAP53621 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.52□□□□□ -1.69
COPAP53621 AL512649.1-201ENST00000428997 581 ntBASIC4.52□□□□□ -1.69
COPAP53621 LSM1P1-201ENST00000438629 273 ntBASIC4.52□□□□□ -1.69
COPAP53621 UBE2V1P3-201ENST00000439651 417 ntBASIC4.52□□□□□ -1.69
COPAP53621 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.52□□□□□ -1.69
COPAP53621 COX6CP12-201ENST00000446748 202 ntBASIC4.52□□□□□ -1.69
COPAP53621 NUTF2P3-201ENST00000448540 384 ntBASIC4.52□□□□□ -1.69
COPAP53621 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 BX322784.1-201ENST00000455793 1077 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC091564.1-201ENST00000464563 479 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC091167.1-201ENST00000492017 396 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.52□□□□□ -1.69
COPAP53621 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 AC024589.1-201ENST00000512207 263 ntBASIC4.52□□□□□ -1.69
COPAP53621 RNA5SP154-201ENST00000516193 111 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC090281.1-201ENST00000523019 276 ntBASIC4.52□□□□□ -1.69
COPAP53621 AL139174.1-201ENST00000531489 886 ntBASIC4.52□□□□□ -1.69
COPAP53621 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.52□□□□□ -1.69
COPAP53621 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 AC068587.4-201ENST00000533893 186 ntBASIC4.52□□□□□ -1.69
COPAP53621 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.52□□□□□ -1.69
COPAP53621 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.52□□□□□ -1.69
COPAP53621 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.52□□□□□ -1.69
COPAP53621 AC087752.4-201ENST00000605911 462 ntBASIC4.52□□□□□ -1.69
COPAP53621 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.52□□□□□ -1.69
COPAP53621 AC097468.3-201ENST00000607956 456 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC239868.4-201ENST00000608318 671 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC104073.3-201ENST00000610942 955 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC025594.3-201ENST00000613068 790 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC008121.2-201ENST00000614647 523 ntBASIC4.52□□□□□ -1.69
COPAP53621 MIR6891-201ENST00000618788 93 ntBASIC4.52□□□□□ -1.69
COPAP53621 AC006065.6-201ENST00000625201 545 ntBASIC4.52□□□□□ -1.69
COPAP53621 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COPAP53621 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPAP53621 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COPAP53621 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
COPAP53621 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
COPAP53621 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COPAP53621 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
COPAP53621 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.52□□□□□ -1.69
COPAP53621 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COPAP53621 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COPAP53621 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.51□□□□□ -1.69
COPAP53621 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COPAP53621 Y_RNA.126-201ENST00000363382 111 ntBASIC4.51□□□□□ -1.69
COPAP53621 RNU4-91P-201ENST00000364778 135 ntBASIC4.51□□□□□ -1.69
COPAP53621 RNA5SP22-201ENST00000365393 109 ntBASIC4.51□□□□□ -1.69
COPAP53621 RNA5SP366-201ENST00000365454 123 ntBASIC4.51□□□□□ -1.69
COPAP53621 RNU6-878P-201ENST00000384578 110 ntBASIC4.51□□□□□ -1.69
COPAP53621 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COPAP53621 RN7SKP167-201ENST00000411047 285 ntBASIC4.51□□□□□ -1.69
COPAP53621 AL663109.1-201ENST00000411498 844 ntBASIC4.51□□□□□ -1.69
COPAP53621 AL139095.3-201ENST00000419672 1203 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC012065.2-201ENST00000421295 375 ntBASIC4.51□□□□□ -1.69
COPAP53621 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COPAP53621 AL389915.1-201ENST00000422463 466 ntBASIC4.51□□□□□ -1.69
COPAP53621 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COPAP53621 PRELID3BP10-201ENST00000431957 584 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 AC127537.2-201ENST00000439258 465 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC069285.2-201ENST00000440210 275 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 AL121877.1-201ENST00000453704 622 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 CFTRP1-201ENST00000456646 183 ntBASIC4.51□□□□□ -1.69
COPAP53621 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.51□□□□□ -1.69
COPAP53621 AC010469.1-201ENST00000463864 576 ntBASIC4.51□□□□□ -1.69
COPAP53621 RPL31P50-201ENST00000471002 296 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC106872.3-201ENST00000495104 446 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.51□□□□□ -1.69
COPAP53621 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 POU5F1P7-201ENST00000508759 541 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.51□□□□□ -1.69
COPAP53621 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.51□□□□□ -1.69
COPAP53621 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.51□□□□□ -1.69
COPAP53621 AC116347.2-201ENST00000514912 523 ntBASIC4.51□□□□□ -1.69
COPAP53621 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms