Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AL645937.1-201ENST00000641739 1652 ntBASIC2.58□□□□□ -2
CDC34P49427 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.58□□□□□ -2
CDC34P49427 SPRR2C-201ENST00000290702 219 ntBASIC2.58□□□□□ -2
CDC34P49427 AL121657.1-201ENST00000327215 531 ntBASIC2.58□□□□□ -2
CDC34P49427 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDC34P49427 SNORA27.3-201ENST00000364937 134 ntBASIC2.58□□□□□ -2
CDC34P49427 SNORA70C-201ENST00000384538 135 ntBASIC2.58□□□□□ -2
CDC34P49427 MIR493-201ENST00000385254 89 ntBASIC2.58□□□□□ -2
CDC34P49427 ATP5F1P6-201ENST00000402768 767 ntBASIC2.58□□□□□ -2
CDC34P49427 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CDC34P49427 RNA5SP317-201ENST00000410176 116 ntBASIC2.58□□□□□ -2
CDC34P49427 RNA5SP311-201ENST00000411290 116 ntBASIC2.58□□□□□ -2
CDC34P49427 TATDN1P1-201ENST00000414123 891 ntBASIC2.58□□□□□ -2
CDC34P49427 AC092447.6-201ENST00000414578 210 ntBASIC2.58□□□□□ -2
CDC34P49427 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.58□□□□□ -2
CDC34P49427 RPL18P10-201ENST00000425606 538 ntBASIC2.58□□□□□ -2
CDC34P49427 AL390023.1-201ENST00000428836 262 ntBASIC2.58□□□□□ -2
CDC34P49427 EZH2P1-201ENST00000431167 291 ntBASIC2.58□□□□□ -2
CDC34P49427 RAB11AP1-201ENST00000442978 646 ntBASIC2.58□□□□□ -2
CDC34P49427 RPL21P89-201ENST00000444021 467 ntBASIC2.58□□□□□ -2
CDC34P49427 AC104073.1-201ENST00000451988 151 ntBASIC2.58□□□□□ -2
CDC34P49427 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.58□□□□□ -2
CDC34P49427 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.58□□□□□ -2
CDC34P49427 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.58□□□□□ -2
CDC34P49427 RPS29P22-201ENST00000472363 168 ntBASIC2.58□□□□□ -2
CDC34P49427 AC103975.1-201ENST00000482506 483 ntBASIC2.58□□□□□ -2
CDC34P49427 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.58□□□□□ -2
CDC34P49427 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.58□□□□□ -2
CDC34P49427 RNA5SP315-201ENST00000516340 116 ntBASIC2.58□□□□□ -2
CDC34P49427 RNA5SP312-201ENST00000517068 116 ntBASIC2.58□□□□□ -2
CDC34P49427 HIGD1AP6-201ENST00000521833 279 ntBASIC2.58□□□□□ -2
CDC34P49427 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.58□□□□□ -2
CDC34P49427 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.58□□□□□ -2
CDC34P49427 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.58□□□□□ -2
CDC34P49427 AC051619.2-201ENST00000559063 397 ntBASIC2.58□□□□□ -2
CDC34P49427 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.58□□□□□ -2
CDC34P49427 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.58□□□□□ -2
CDC34P49427 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.58□□□□□ -2
CDC34P49427 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.58□□□□□ -2
CDC34P49427 CYCSP41-201ENST00000616920 296 ntBASIC2.58□□□□□ -2
CDC34P49427 AL356321.1-201ENST00000621360 228 ntBASIC2.58□□□□□ -2
CDC34P49427 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.58□□□□□ -2
CDC34P49427 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CDC34P49427 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDC34P49427 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDC34P49427 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDC34P49427 AC010680.1-201ENST00000590024 3590 ntBASIC2.57□□□□□ -2
CDC34P49427 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
CDC34P49427 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 NACA3P-201ENST00000359690 648 ntBASIC2.57□□□□□ -2
CDC34P49427 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.57□□□□□ -2
CDC34P49427 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 SNORD3H-201ENST00000384486 214 ntBASIC2.57□□□□□ -2
CDC34P49427 ARF4P3-201ENST00000397387 509 ntBASIC2.57□□□□□ -2
CDC34P49427 PPIAP31-201ENST00000405422 495 ntBASIC2.57□□□□□ -2
CDC34P49427 ATP5A1P2-201ENST00000412323 255 ntBASIC2.57□□□□□ -2
CDC34P49427 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.57□□□□□ -2
CDC34P49427 OR6K5P-201ENST00000447050 945 ntBASIC2.57□□□□□ -2
CDC34P49427 AC114755.5-201ENST00000447760 831 ntBASIC2.57□□□□□ -2
CDC34P49427 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.57□□□□□ -2
CDC34P49427 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.57□□□□□ -2
CDC34P49427 RPS27P23-201ENST00000487608 251 ntBASIC2.57□□□□□ -2
CDC34P49427 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.57□□□□□ -2
CDC34P49427 APOOP4-201ENST00000513530 597 ntBASIC2.57□□□□□ -2
CDC34P49427 FAM60DP-201ENST00000524174 632 ntBASIC2.57□□□□□ -2
CDC34P49427 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.57□□□□□ -2
CDC34P49427 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.57□□□□□ -2
CDC34P49427 MED28P6-201ENST00000558776 231 ntBASIC2.57□□□□□ -2
CDC34P49427 MIR4284-201ENST00000578924 81 ntBASIC2.57□□□□□ -2
CDC34P49427 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.57□□□□□ -2
CDC34P49427 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.57□□□□□ -2
CDC34P49427 AC016542.1-201ENST00000608259 493 ntBASIC2.57□□□□□ -2
CDC34P49427 AC099676.1-201ENST00000608886 657 ntBASIC2.57□□□□□ -2
CDC34P49427 AL161734.1-201ENST00000609720 557 ntBASIC2.57□□□□□ -2
CDC34P49427 MIR7851-201ENST00000610611 160 ntBASIC2.57□□□□□ -2
CDC34P49427 AC135776.4-201ENST00000624300 1904 ntBASIC2.57□□□□□ -2
CDC34P49427 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CDC34P49427 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDC34P49427 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CDC34P49427 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CDC34P49427 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDC34P49427 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDC34P49427 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CDC34P49427 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.56□□□□□ -2
CDC34P49427 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.56□□□□□ -2
CDC34P49427 TAF9BP2-201ENST00000400856 499 ntBASIC2.56□□□□□ -2
CDC34P49427 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.56□□□□□ -2
CDC34P49427 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.56□□□□□ -2
CDC34P49427 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.56□□□□□ -2
CDC34P49427 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.56□□□□□ -2
CDC34P49427 AL356320.2-201ENST00000417263 507 ntBASIC2.56□□□□□ -2
CDC34P49427 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
CDC34P49427 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms