Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC012254.4-201ENST00000588843 273 ntBASIC3.83□□□□□ -1.8
USP6P35125 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.83□□□□□ -1.8
USP6P35125 AC098483.2-201ENST00000603158 454 ntBASIC3.83□□□□□ -1.8
USP6P35125 AP000720.1-201ENST00000625091 483 ntBASIC3.83□□□□□ -1.8
USP6P35125 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
USP6P35125 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP6P35125 AL450326.2-201ENST00000421913 1962 ntBASIC3.82□□□□□ -1.8
USP6P35125 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.82□□□□□ -1.8
USP6P35125 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP6P35125 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP6P35125 AC093010.3-201ENST00000570269 15214 ntBASIC3.82□□□□□ -1.8
USP6P35125 METTL21EP-201ENST00000298105 713 ntBASIC3.82□□□□□ -1.8
USP6P35125 AC245291.1-201ENST00000419501 328 ntBASIC3.82□□□□□ -1.8
USP6P35125 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.82□□□□□ -1.8
USP6P35125 MTND2P8-201ENST00000450555 1025 ntBASIC3.82□□□□□ -1.8
USP6P35125 AC128713.1-201ENST00000471495 306 ntBASIC3.82□□□□□ -1.8
USP6P35125 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.82□□□□□ -1.8
USP6P35125 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.82□□□□□ -1.8
USP6P35125 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.82□□□□□ -1.8
USP6P35125 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.82□□□□□ -1.8
USP6P35125 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP6P35125 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.82□□□□□ -1.8
USP6P35125 AC234778.2-201ENST00000566241 354 ntBASIC3.82□□□□□ -1.8
USP6P35125 MIR8084-201ENST00000614105 89 ntBASIC3.82□□□□□ -1.8
USP6P35125 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP6P35125 RMST_10.1-201ENST00000616309 154 ntBASIC3.82□□□□□ -1.8
USP6P35125 MIR7843-201ENST00000622274 79 ntBASIC3.82□□□□□ -1.8
USP6P35125 AC116563.2-201ENST00000624751 535 ntBASIC3.82□□□□□ -1.8
USP6P35125 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP6P35125 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.82□□□□□ -1.8
USP6P35125 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
USP6P35125 RNA5SP502-201ENST00000362694 119 ntBASIC3.81□□□□□ -1.8
USP6P35125 VTA1P1-201ENST00000414044 866 ntBASIC3.81□□□□□ -1.8
USP6P35125 RPL21P112-201ENST00000434403 463 ntBASIC3.81□□□□□ -1.8
USP6P35125 RPL7P29-201ENST00000437151 728 ntBASIC3.81□□□□□ -1.8
USP6P35125 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
USP6P35125 AC104687.1-201ENST00000485829 412 ntBASIC3.81□□□□□ -1.8
USP6P35125 RNU6-1231P-201ENST00000517185 103 ntBASIC3.81□□□□□ -1.8
USP6P35125 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.81□□□□□ -1.8
USP6P35125 AC092451.2-201ENST00000538746 658 ntBASIC3.81□□□□□ -1.8
USP6P35125 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.81□□□□□ -1.8
USP6P35125 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.81□□□□□ -1.8
USP6P35125 AP000919.1-202ENST00000581139 1264 ntBASIC3.81□□□□□ -1.8
USP6P35125 MIR4524B-201ENST00000581569 115 ntBASIC3.81□□□□□ -1.8
USP6P35125 AC026790.2-201ENST00000606282 430 ntBASIC3.81□□□□□ -1.8
USP6P35125 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.81□□□□□ -1.8
USP6P35125 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.81□□□□□ -1.8
USP6P35125 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP6P35125 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP6P35125 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP6P35125 AC008432.1-201ENST00000615912 1320 ntBASIC3.81□□□□□ -1.8
USP6P35125 MFSD8-213ENST00000641134 1327 ntBASIC3.81□□□□□ -1.8
USP6P35125 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
USP6P35125 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP6P35125 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP6P35125 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
USP6P35125 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP6P35125 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.8□□□□□ -1.8
USP6P35125 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP6P35125 RNU6-481P-201ENST00000384194 107 ntBASIC3.8□□□□□ -1.8
USP6P35125 AL590290.1-201ENST00000405336 380 ntBASIC3.8□□□□□ -1.8
USP6P35125 HMGB3P31-201ENST00000413333 595 ntBASIC3.8□□□□□ -1.8
USP6P35125 AC245054.2-201ENST00000415639 319 ntBASIC3.8□□□□□ -1.8
USP6P35125 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.8□□□□□ -1.8
USP6P35125 AC009965.2-201ENST00000425328 970 ntBASIC3.8□□□□□ -1.8
USP6P35125 RPL23AP22-201ENST00000437556 453 ntBASIC3.8□□□□□ -1.8
USP6P35125 AC010095.1-201ENST00000443543 144 ntBASIC3.8□□□□□ -1.8
USP6P35125 MOB1AP2-201ENST00000446060 614 ntBASIC3.8□□□□□ -1.8
USP6P35125 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.8□□□□□ -1.8
USP6P35125 AC126121.1-201ENST00000482313 553 ntBASIC3.8□□□□□ -1.8
USP6P35125 MTCO2P9-201ENST00000503214 694 ntBASIC3.8□□□□□ -1.8
USP6P35125 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.8□□□□□ -1.8
USP6P35125 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.8□□□□□ -1.8
USP6P35125 MTCO1P4-201ENST00000520516 1409 ntBASIC3.8□□□□□ -1.8
USP6P35125 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.8□□□□□ -1.8
USP6P35125 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.8□□□□□ -1.8
USP6P35125 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.8□□□□□ -1.8
USP6P35125 AC090079.2-201ENST00000575289 768 ntBASIC3.8□□□□□ -1.8
USP6P35125 AL355816.1-201ENST00000607951 118 ntBASIC3.8□□□□□ -1.8
USP6P35125 AC078899.5-201ENST00000612475 178 ntBASIC3.8□□□□□ -1.8
USP6P35125 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP6P35125 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USP6P35125 U6.107-201ENST00000637108 79 ntBASIC3.8□□□□□ -1.8
USP6P35125 AL353743.4-201ENST00000422653 1547 ntBASIC3.8□□□□□ -1.8
USP6P35125 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP6P35125 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP6P35125 AC011155.1-201ENST00000316512 456 ntBASIC3.79□□□□□ -1.8
USP6P35125 RNA5SP383-201ENST00000362934 120 ntBASIC3.79□□□□□ -1.8
USP6P35125 SNORA70B-201ENST00000384210 135 ntBASIC3.79□□□□□ -1.8
USP6P35125 SNORA67.4-201ENST00000384688 142 ntBASIC3.79□□□□□ -1.8
USP6P35125 MIR196B-201ENST00000384852 84 ntBASIC3.79□□□□□ -1.8
USP6P35125 BMS1P22-201ENST00000414726 313 ntBASIC3.79□□□□□ -1.8
USP6P35125 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.79□□□□□ -1.8
USP6P35125 AL606495.1-201ENST00000422100 813 ntBASIC3.79□□□□□ -1.8
USP6P35125 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.79□□□□□ -1.8
USP6P35125 TPTE2P6-202ENST00000445572 1007 ntBASIC3.79□□□□□ -1.8
USP6P35125 RPL7P55-201ENST00000450522 746 ntBASIC3.79□□□□□ -1.8
USP6P35125 TPMTP4-201ENST00000450749 678 ntBASIC3.79□□□□□ -1.8
USP6P35125 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.79□□□□□ -1.8
USP6P35125 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms