Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 AC068587.2-201ENST00000478386 781 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.88□□□□□ -1.95
COL4A5P29400 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 RN7SKP34-201ENST00000516142 244 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A5P29400 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A5P29400 AL161912.3-201ENST00000605404 628 ntBASIC2.88□□□□□ -1.95
COL4A5P29400 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
COL4A5P29400 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.87□□□□□ -1.95
COL4A5P29400 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL4A5P29400 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
COL4A5P29400 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.87□□□□□ -1.95
COL4A5P29400 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL4A5P29400 AL023284.1-201ENST00000403956 276 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 GSTA9P-201ENST00000406231 611 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.87□□□□□ -1.95
COL4A5P29400 ATG3P1-201ENST00000419507 911 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC2.87□□□□□ -1.95
COL4A5P29400 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.87□□□□□ -1.95
COL4A5P29400 BTG3P1-201ENST00000435859 716 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.87□□□□□ -1.95
COL4A5P29400 AC021146.5-201ENST00000503544 545 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 KCTD9P5-201ENST00000504141 1170 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 HAUS1P1-201ENST00000505275 832 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 AL109741.3-201ENST00000561748 592 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 AP001004.1-201ENST00000582468 324 ntBASIC2.87□□□□□ -1.95
COL4A5P29400 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.87□□□□□ -1.95
COL4A5P29400 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.87□□□□□ -1.95
COL4A5P29400 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COL4A5P29400 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
COL4A5P29400 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL4A5P29400 Y_RNA.269-201ENST00000364685 89 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 Y_RNA.338-201ENST00000365320 114 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 EIF5P1-201ENST00000400019 1231 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 RPL23AP11-201ENST00000475260 469 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 AC112673.1-201ENST00000513168 575 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.86□□□□□ -1.95
COL4A5P29400 AP001207.1-201ENST00000524051 481 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.86□□□□□ -1.95
COL4A5P29400 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.86□□□□□ -1.95
COL4A5P29400 NRBF2P1-201ENST00000587407 859 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 AC110741.2-201ENST00000605278 268 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 AP003072.5-201ENST00000623872 773 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL4A5P29400 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.86□□□□□ -1.95
COL4A5P29400 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.86□□□□□ -1.95
COL4A5P29400 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL4A5P29400 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.86□□□□□ -1.95
COL4A5P29400 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL4A5P29400 AL161781.1-201ENST00000354277 403 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A5P29400 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.85□□□□□ -1.95
COL4A5P29400 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
COL4A5P29400 VN1R17P-201ENST00000472048 1090 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 AL024509.2-201ENST00000493462 493 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.85□□□□□ -1.95
COL4A5P29400 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A5P29400 OR4A45P-201ENST00000529954 901 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.85□□□□□ -1.95
COL4A5P29400 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.85□□□□□ -1.95
COL4A5P29400 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.85□□□□□ -1.95
COL4A5P29400 AL159169.2-201ENST00000610061 1269 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 MTND5P19-201ENST00000424872 1794 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A5P29400 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
COL4A5P29400 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.85□□□□□ -1.95
COL4A5P29400 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A5P29400 AC244033.1-201ENST00000426826 870 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 AC245517.2-201ENST00000442890 346 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 AC106872.3-201ENST00000495104 446 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 TXNP6-201ENST00000510190 310 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 CUL4AP1-201ENST00000514750 1863 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.85□□□□□ -1.95
COL4A5P29400 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.85□□□□□ -1.95
COL4A5P29400 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A5P29400 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A5P29400 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A5P29400 AC011492.1-201ENST00000600023 315 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 AC007342.7-201ENST00000624610 2337 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 AC110994.2-201ENST00000635481 492 ntBASIC2.85□□□□□ -1.95
COL4A5P29400 MAPK10-322ENST00000641485 4530 ntBASIC2.84□□□□□ -1.95
COL4A5P29400 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
COL4A5P29400 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
COL4A5P29400 Y_RNA.796-201ENST00000364268 102 ntBASIC2.84□□□□□ -1.95
COL4A5P29400 Y_RNA.799-201ENST00000364992 102 ntBASIC2.84□□□□□ -1.95
COL4A5P29400 RN7SKP32-201ENST00000410167 303 ntBASIC2.84□□□□□ -1.95
COL4A5P29400 AL158825.1-201ENST00000414735 521 ntBASIC2.84□□□□□ -1.95
COL4A5P29400 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.84□□□□□ -1.95
COL4A5P29400 AL356806.1-201ENST00000422524 916 ntBASIC2.84□□□□□ -1.95
COL4A5P29400 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.84□□□□□ -1.95
COL4A5P29400 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms