Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.78□□□□□ -1.8
CDH3P22223 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH3P22223 HIGD1AP10-201ENST00000527837 282 ntBASIC3.78□□□□□ -1.8
CDH3P22223 DUXAP5-201ENST00000529668 529 ntBASIC3.78□□□□□ -1.8
CDH3P22223 OR4A12P-201ENST00000530847 918 ntBASIC3.78□□□□□ -1.8
CDH3P22223 PDCL2P2-201ENST00000533651 189 ntBASIC3.78□□□□□ -1.8
CDH3P22223 CYCSP30-201ENST00000546447 172 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
CDH3P22223 DUXAP6-201ENST00000553858 601 ntBASIC3.78□□□□□ -1.8
CDH3P22223 GNRHR2P1-201ENST00000555315 631 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH3P22223 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH3P22223 AC112230.1-201ENST00000604342 547 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC131235.4-201ENST00000609288 620 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC097478.2-201ENST00000610572 514 ntBASIC3.78□□□□□ -1.8
CDH3P22223 AC005332.6-201ENST00000613178 446 ntBASIC3.78□□□□□ -1.8
CDH3P22223 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH3P22223 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CDH3P22223 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CDH3P22223 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH3P22223 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CDH3P22223 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CDH3P22223 AP000776.1-201ENST00000530032 1663 ntBASIC3.78□□□□□ -1.81
CDH3P22223 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
CDH3P22223 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH3P22223 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH3P22223 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH3P22223 AC107982.1-201ENST00000507171 1300 ntBASIC3.77□□□□□ -1.81
CDH3P22223 RNA5SP295-201ENST00000362655 121 ntBASIC3.77□□□□□ -1.81
CDH3P22223 RNU6-1214P-201ENST00000363650 109 ntBASIC3.77□□□□□ -1.81
CDH3P22223 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH3P22223 MIR649-201ENST00000384843 97 ntBASIC3.77□□□□□ -1.81
CDH3P22223 MIR30B-201ENST00000384850 88 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AL590704.1-201ENST00000402856 794 ntBASIC3.77□□□□□ -1.81
CDH3P22223 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 MTND4P22-201ENST00000413116 1169 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH3P22223 HMGB1P12-201ENST00000438594 598 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH3P22223 MTND1P31-201ENST00000449206 961 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH3P22223 WBP1LP4-201ENST00000505043 344 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AC104090.1-201ENST00000506341 1171 ntBASIC3.77□□□□□ -1.81
CDH3P22223 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH3P22223 MTCYBP37-201ENST00000510642 1133 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AP000619.3-201ENST00000535634 1127 ntBASIC3.77□□□□□ -1.81
CDH3P22223 YPEL5P3-201ENST00000547227 352 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH3P22223 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH3P22223 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH3P22223 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 AC009094.1-201ENST00000564443 426 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH3P22223 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH3P22223 AC034105.4-201ENST00000568304 277 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH3P22223 AC099489.2-201ENST00000574976 260 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AC022146.1-201ENST00000595307 847 ntBASIC3.77□□□□□ -1.81
CDH3P22223 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH3P22223 TUSC7.1-201ENST00000610969 165 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AC231759.1-201ENST00000616455 597 ntBASIC3.77□□□□□ -1.81
CDH3P22223 AP000484.1-201ENST00000620067 1252 ntBASIC3.77□□□□□ -1.81
CDH3P22223 FP236240.3-201ENST00000623061 327 ntBASIC3.77□□□□□ -1.81
CDH3P22223 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDH3P22223 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CDH3P22223 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CDH3P22223 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH3P22223 ELL2P4-201ENST00000446870 1376 ntBASIC3.76□□□□□ -1.81
CDH3P22223 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH3P22223 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH3P22223 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH3P22223 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
CDH3P22223 AC116096.1-201ENST00000566804 2314 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC006504.1-201ENST00000562493 3666 ntBASIC3.76□□□□□ -1.81
CDH3P22223 RNU1-85P-201ENST00000364127 164 ntBASIC3.76□□□□□ -1.81
CDH3P22223 RNU6-621P-201ENST00000364752 109 ntBASIC3.76□□□□□ -1.81
CDH3P22223 RNU6-157P-201ENST00000383957 107 ntBASIC3.76□□□□□ -1.81
CDH3P22223 RNU6-1226P-201ENST00000384317 107 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AL450338.1-201ENST00000407987 512 ntBASIC3.76□□□□□ -1.81
CDH3P22223 RNU6ATAC-201ENST00000408749 126 ntBASIC3.76□□□□□ -1.81
CDH3P22223 SNORA11-201ENST00000408789 128 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC069218.2-201ENST00000411665 344 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH3P22223 SDCBPP2-201ENST00000424643 885 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AL050321.1-201ENST00000432363 400 ntBASIC3.76□□□□□ -1.81
CDH3P22223 MTND1P32-201ENST00000433043 938 ntBASIC3.76□□□□□ -1.81
CDH3P22223 HMGB1P37-201ENST00000439613 609 ntBASIC3.76□□□□□ -1.81
CDH3P22223 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH3P22223 RN7SL330P-201ENST00000469709 307 ntBASIC3.76□□□□□ -1.81
CDH3P22223 MTND2P14-201ENST00000482139 351 ntBASIC3.76□□□□□ -1.81
CDH3P22223 RPS4XP13-201ENST00000483219 789 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC021146.8-201ENST00000507455 733 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH3P22223 NDUFA5P2-201ENST00000519723 344 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms