Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC099489.2-201ENST00000574976 260 ntBASIC3.68□□□□□ -1.82
HLA-DPA1P20036 FAM60BP-201ENST00000578364 658 ntBASIC3.68□□□□□ -1.82
HLA-DPA1P20036 MIR4474-201ENST00000579189 78 ntBASIC3.68□□□□□ -1.82
HLA-DPA1P20036 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPA1P20036 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPA1P20036 RNU6-1192P-201ENST00000612197 107 ntBASIC3.68□□□□□ -1.82
HLA-DPA1P20036 RNU6-489P-201ENST00000618289 107 ntBASIC3.68□□□□□ -1.82
HLA-DPA1P20036 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DPA1P20036 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DPA1P20036 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
HLA-DPA1P20036 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
HLA-DPA1P20036 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 OR5H2-201ENST00000355273 945 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AL359837.1-201ENST00000381357 287 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RNU6-878P-201ENST00000384578 110 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 Y_RNA.578-201ENST00000390903 88 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC007066.1-201ENST00000392902 381 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RPL7P60-201ENST00000397636 735 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 LUZP4P1-201ENST00000415420 344 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 USP9YP21-201ENST00000420603 432 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 GLRXP1-201ENST00000423261 334 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 MTCO3P16-201ENST00000454456 754 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AL136097.1-201ENST00000456945 913 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 U8.18-201ENST00000459285 133 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AL049830.2-201ENST00000480072 201 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 ACTR3P3-201ENST00000480448 893 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 OR4G11P-201ENST00000492842 939 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 CAB39P1-201ENST00000502277 460 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 HMGN1P11-201ENST00000508668 303 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RNU6-1095P-201ENST00000516148 108 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RNU6-579P-201ENST00000516879 102 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RNU6-1261P-201ENST00000517194 104 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RANP9-201ENST00000519957 271 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC138915.2-201ENST00000569776 97 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RPL23AP92-201ENST00000603609 255 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC092574.1-201ENST00000609771 420 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 CR392039.5-201ENST00000623201 510 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AP003485.1-201ENST00000625093 753 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 AC021755.1-201ENST00000559747 1447 ntBASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DPA1P20036 RPL7P26-201ENST00000333817 754 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 RNU6-283P-201ENST00000364788 107 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 MTCO1P56-201ENST00000401674 224 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC109780.2-201ENST00000413467 845 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 OR1AA1P-201ENST00000419597 916 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC245054.1-201ENST00000420944 258 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 PSMA6P3-201ENST00000428242 164 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 MTCYBP31-201ENST00000438855 1122 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 RPL17P49-201ENST00000443728 411 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AL133547.1-201ENST00000448546 220 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC079776.3-201ENST00000450665 370 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 RNU7-170P-201ENST00000459303 61 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 SUMO2P5-201ENST00000506790 245 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC069306.1-201ENST00000507006 843 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC023161.2-201ENST00000551218 780 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AL163153.1-201ENST00000554223 283 ntBASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DPA1P20036 BDH2P1-201ENST00000602288 736 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms