Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 HMGB3P20-201ENST00000417997 600 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC3P19447 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC3P19447 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC3P19447 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC3P19447 RAD23BP3-201ENST00000454157 1152 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 RN7SL189P-201ENST00000468631 289 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 RPS3AP50-201ENST00000487064 803 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC008897.1-201ENST00000494006 347 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 CEACAMP10-202ENST00000495431 496 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC074344.1-201ENST00000512823 224 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC3P19447 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC3P19447 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC3P19447 AC011979.2-201ENST00000527568 352 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC118273.2-201ENST00000532092 465 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC3P19447 SLC25A36P1-201ENST00000590111 465 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC007621.1-201ENST00000604544 437 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 IGHV3-29-201ENST00000604817 344 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC090948.1-201ENST00000607464 549 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC093788.1-201ENST00000609356 927 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC3P19447 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC3P19447 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC3P19447 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ERCC3P19447 AC090229.1-201ENST00000590983 1609 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC3P19447 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC3P19447 AC138915.3-201ENST00000562908 1389 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC3P19447 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC3P19447 AP001642.1-201ENST00000624727 2117 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ERCC3P19447 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC3P19447 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
ERCC3P19447 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC3P19447 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC3P19447 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC3P19447 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.46
ERCC3P19447 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC3P19447 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC3P19447 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
ERCC3P19447 SNORD56.2-201ENST00000363242 71 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 RNU6-1322P-201ENST00000364309 107 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC3P19447 MIR192-201ENST00000384915 110 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 MIR1-2-201ENST00000384961 85 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 RNU6-837P-201ENST00000391056 108 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 RN7SKP159-201ENST00000410657 292 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC016397.1-201ENST00000412463 242 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.9□□□□□ -1.46
ERCC3P19447 AL590139.1-201ENST00000416267 400 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 MRPL50P2-201ENST00000416821 482 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 RPS12P23-201ENST00000419579 400 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC245028.1-201ENST00000423259 256 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC3P19447 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC3P19447 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC3P19447 AC104651.2-201ENST00000447549 528 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC114755.5-201ENST00000447760 831 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC010655.1-201ENST00000449336 292 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC3P19447 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC3P19447 AC025465.4-201ENST00000513422 638 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 RNU6-410P-201ENST00000517006 107 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 NRON-201ENST00000517270 370 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC103783.1-201ENST00000520506 373 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC126177.3-201ENST00000551839 688 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.9□□□□□ -1.46
ERCC3P19447 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC3P19447 MIR4737-201ENST00000583979 81 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.9□□□□□ -1.46
ERCC3P19447 AC025449.1-201ENST00000603896 529 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC010680.4-201ENST00000605334 543 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.9□□□□□ -1.46
ERCC3P19447 AL023881.1-201ENST00000621088 301 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 AL136313.1-201ENST00000624804 202 ntBASIC5.9□□□□□ -1.46
ERCC3P19447 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ERCC3P19447 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ERCC3P19447 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ERCC3P19447 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
ERCC3P19447 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ERCC3P19447 AL138713.1-201ENST00000624026 2130 ntBASIC5.9□□□□□ -1.47
ERCC3P19447 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.9□□□□□ -1.47
ERCC3P19447 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.9□□□□□ -1.47
ERCC3P19447 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ERCC3P19447 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ERCC3P19447 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
ERCC3P19447 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
ERCC3P19447 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.89□□□□□ -1.47
ERCC3P19447 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.89□□□□□ -1.47
ERCC3P19447 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ERCC3P19447 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms