Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.47□□□□□ -1.53
NID1P14543 AC024884.1-201ENST00000620583 399 ntBASIC5.47□□□□□ -1.53
NID1P14543 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.47□□□□□ -1.53
NID1P14543 AC132825.6-201ENST00000638861 357 ntBASIC5.47□□□□□ -1.53
NID1P14543 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NID1P14543 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.47□□□□□ -1.53
NID1P14543 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.47□□□□□ -1.53
NID1P14543 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NID1P14543 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.47□□□□□ -1.53
NID1P14543 AC020656.2-201ENST00000613291 5309 ntBASIC5.47□□□□□ -1.53
NID1P14543 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NID1P14543 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NID1P14543 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NID1P14543 AC012254.3-201ENST00000591183 2117 ntBASIC5.47□□□□□ -1.53
NID1P14543 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NID1P14543 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NID1P14543 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NID1P14543 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NID1P14543 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
NID1P14543 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
NID1P14543 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NID1P14543 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NID1P14543 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 Y_RNA.462-201ENST00000384268 102 ntBASIC5.46□□□□□ -1.54
NID1P14543 RNU6-306P-201ENST00000384617 107 ntBASIC5.46□□□□□ -1.54
NID1P14543 AC096664.2-201ENST00000411843 406 ntBASIC5.46□□□□□ -1.54
NID1P14543 HMGN1P20-201ENST00000411849 300 ntBASIC5.46□□□□□ -1.54
NID1P14543 AC011933.1-201ENST00000413334 321 ntBASIC5.46□□□□□ -1.54
NID1P14543 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.46□□□□□ -1.54
NID1P14543 RPL7P37-201ENST00000425095 738 ntBASIC5.46□□□□□ -1.54
NID1P14543 USP9YP30-201ENST00000430729 455 ntBASIC5.46□□□□□ -1.54
NID1P14543 RPL23AP69-201ENST00000431134 458 ntBASIC5.46□□□□□ -1.54
NID1P14543 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.46□□□□□ -1.54
NID1P14543 AC243772.1-201ENST00000451620 410 ntBASIC5.46□□□□□ -1.54
NID1P14543 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.46□□□□□ -1.54
NID1P14543 AC009963.3-201ENST00000458090 486 ntBASIC5.46□□□□□ -1.54
NID1P14543 RNU7-59P-201ENST00000459101 61 ntBASIC5.46□□□□□ -1.54
NID1P14543 AP001992.1-205ENST00000462248 379 ntBASIC5.46□□□□□ -1.54
NID1P14543 RPL9P32-201ENST00000464118 620 ntBASIC5.46□□□□□ -1.54
NID1P14543 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.46□□□□□ -1.54
NID1P14543 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.46□□□□□ -1.54
NID1P14543 AC022447.4-201ENST00000504053 364 ntBASIC5.46□□□□□ -1.54
NID1P14543 PGAM1P13-201ENST00000507497 754 ntBASIC5.46□□□□□ -1.54
NID1P14543 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.46□□□□□ -1.54
NID1P14543 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.46□□□□□ -1.54
NID1P14543 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.46□□□□□ -1.54
NID1P14543 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.46□□□□□ -1.54
NID1P14543 GAPDHP62-201ENST00000515313 990 ntBASIC5.46□□□□□ -1.54
NID1P14543 SNORA40.14-201ENST00000516543 86 ntBASIC5.46□□□□□ -1.54
NID1P14543 RNU6-1069P-201ENST00000516612 133 ntBASIC5.46□□□□□ -1.54
NID1P14543 FAM60DP-201ENST00000524174 632 ntBASIC5.46□□□□□ -1.54
NID1P14543 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.46□□□□□ -1.54
NID1P14543 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.46□□□□□ -1.54
NID1P14543 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.46□□□□□ -1.54
NID1P14543 AC091516.1-201ENST00000549191 703 ntBASIC5.46□□□□□ -1.54
NID1P14543 AC079905.1-201ENST00000549280 475 ntBASIC5.46□□□□□ -1.54
NID1P14543 DYNLL1P4-201ENST00000549314 266 ntBASIC5.46□□□□□ -1.54
NID1P14543 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.46□□□□□ -1.54
NID1P14543 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.46□□□□□ -1.54
NID1P14543 MIR548AI-201ENST00000579940 88 ntBASIC5.46□□□□□ -1.54
NID1P14543 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NID1P14543 HMGB1P50-201ENST00000605814 607 ntBASIC5.46□□□□□ -1.54
NID1P14543 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.46□□□□□ -1.54
NID1P14543 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.46□□□□□ -1.54
NID1P14543 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NID1P14543 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NID1P14543 AL359955.1-201ENST00000455242 3275 ntBASIC5.45□□□□□ -1.54
NID1P14543 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NID1P14543 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
NID1P14543 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
NID1P14543 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
NID1P14543 AC074029.4-201ENST00000624796 1859 ntBASIC5.45□□□□□ -1.54
NID1P14543 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NID1P14543 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
NID1P14543 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.45□□□□□ -1.54
NID1P14543 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NID1P14543 Y_RNA.64-201ENST00000362845 102 ntBASIC5.45□□□□□ -1.54
NID1P14543 RNA5SP514-201ENST00000363717 111 ntBASIC5.45□□□□□ -1.54
NID1P14543 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NID1P14543 RNU6-190P-201ENST00000384154 102 ntBASIC5.45□□□□□ -1.54
NID1P14543 Y_RNA.518-201ENST00000384552 113 ntBASIC5.45□□□□□ -1.54
NID1P14543 RNU6-95P-201ENST00000384697 107 ntBASIC5.45□□□□□ -1.54
NID1P14543 RN7SKP206-201ENST00000410823 293 ntBASIC5.45□□□□□ -1.54
NID1P14543 RPL35AP3-201ENST00000414680 288 ntBASIC5.45□□□□□ -1.54
NID1P14543 RPLP0P7-201ENST00000416050 667 ntBASIC5.45□□□□□ -1.54
NID1P14543 ELOCP20-201ENST00000422460 345 ntBASIC5.45□□□□□ -1.54
NID1P14543 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.45□□□□□ -1.54
NID1P14543 AL359672.1-201ENST00000442302 409 ntBASIC5.45□□□□□ -1.54
NID1P14543 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.45□□□□□ -1.54
NID1P14543 CYCSP24-201ENST00000445119 316 ntBASIC5.45□□□□□ -1.54
NID1P14543 RN7SL284P-201ENST00000498823 275 ntBASIC5.45□□□□□ -1.54
NID1P14543 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms