Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 SNORD56.3-201ENST00000363507 71 ntBASIC2.42□□□□□ -2.02
TPRP12270 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC2.42□□□□□ -2.02
TPRP12270 AC112220.1-201ENST00000434628 355 ntBASIC2.42□□□□□ -2.02
TPRP12270 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.42□□□□□ -2.02
TPRP12270 AL589765.3-201ENST00000446084 462 ntBASIC2.42□□□□□ -2.02
TPRP12270 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC2.42□□□□□ -2.02
TPRP12270 AP000893.1-201ENST00000474462 794 ntBASIC2.42□□□□□ -2.02
TPRP12270 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.42□□□□□ -2.02
TPRP12270 AL589994.2-201ENST00000621124 579 ntBASIC2.42□□□□□ -2.02
TPRP12270 LINC00216-201ENST00000623548 1126 ntBASIC2.42□□□□□ -2.02
TPRP12270 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TPRP12270 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
TPRP12270 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TPRP12270 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TPRP12270 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TPRP12270 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.42□□□□□ -2.02
TPRP12270 RPL30P2-201ENST00000414021 291 ntBASIC2.42□□□□□ -2.02
TPRP12270 AC245054.2-201ENST00000415639 319 ntBASIC2.42□□□□□ -2.02
TPRP12270 AL354710.1-201ENST00000453641 246 ntBASIC2.42□□□□□ -2.02
TPRP12270 TVP23BP2-201ENST00000455082 615 ntBASIC2.42□□□□□ -2.02
TPRP12270 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
TPRP12270 MIR2114-201ENST00000516645 80 ntBASIC2.42□□□□□ -2.02
TPRP12270 MFSD8-245ENST00000641743 948 ntBASIC2.42□□□□□ -2.02
TPRP12270 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TPRP12270 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.41□□□□□ -2.02
TPRP12270 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TPRP12270 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
TPRP12270 AC006960.1-201ENST00000419980 153 ntBASIC2.41□□□□□ -2.02
TPRP12270 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.41□□□□□ -2.02
TPRP12270 ELOCP13-201ENST00000443934 329 ntBASIC2.41□□□□□ -2.02
TPRP12270 ATP5J2P3-201ENST00000451550 258 ntBASIC2.41□□□□□ -2.02
TPRP12270 VWA8P1-201ENST00000510889 176 ntBASIC2.41□□□□□ -2.02
TPRP12270 RN7SKP24-201ENST00000515888 284 ntBASIC2.41□□□□□ -2.02
TPRP12270 RNU6-295P-201ENST00000516901 104 ntBASIC2.41□□□□□ -2.02
TPRP12270 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.41□□□□□ -2.02
TPRP12270 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.41□□□□□ -2.02
TPRP12270 AC126118.1-201ENST00000607744 628 ntBASIC2.41□□□□□ -2.02
TPRP12270 AC091903.1-201ENST00000624322 454 ntBASIC2.41□□□□□ -2.02
TPRP12270 AC009039.2-201ENST00000624524 529 ntBASIC2.41□□□□□ -2.02
TPRP12270 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.41□□□□□ -2.02
TPRP12270 AL592494.2-201ENST00000425455 1548 ntBASIC2.41□□□□□ -2.02
TPRP12270 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.41□□□□□ -2.02
TPRP12270 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TPRP12270 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TPRP12270 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.41□□□□□ -2.02
TPRP12270 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TPRP12270 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
TPRP12270 AL121834.1-202ENST00000404494 277 ntBASIC2.41□□□□□ -2.02
TPRP12270 RN7SKP58-201ENST00000411010 305 ntBASIC2.41□□□□□ -2.02
TPRP12270 AC010881.1-201ENST00000433830 235 ntBASIC2.41□□□□□ -2.02
TPRP12270 ISCA1P2-201ENST00000438679 421 ntBASIC2.41□□□□□ -2.02
TPRP12270 HMGB3P11-201ENST00000440127 604 ntBASIC2.41□□□□□ -2.02
TPRP12270 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC2.41□□□□□ -2.02
TPRP12270 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.41□□□□□ -2.02
TPRP12270 RNA5SP320-201ENST00000516263 124 ntBASIC2.41□□□□□ -2.02
TPRP12270 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.41□□□□□ -2.02
TPRP12270 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.4□□□□□ -2.02
TPRP12270 MTND5P6-201ENST00000422338 1798 ntBASIC2.4□□□□□ -2.02
TPRP12270 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
TPRP12270 RPS12P5-201ENST00000423449 371 ntBASIC2.4□□□□□ -2.03
TPRP12270 RPL23AP4-201ENST00000427757 463 ntBASIC2.4□□□□□ -2.03
TPRP12270 AC093663.2-201ENST00000484625 313 ntBASIC2.4□□□□□ -2.03
TPRP12270 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
TPRP12270 HPRT1P3-201ENST00000539521 576 ntBASIC2.4□□□□□ -2.03
TPRP12270 ZNF861P-201ENST00000588126 639 ntBASIC2.4□□□□□ -2.03
TPRP12270 AC092628.2-201ENST00000622492 339 ntBASIC2.4□□□□□ -2.03
TPRP12270 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.4□□□□□ -2.03
TPRP12270 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.4□□□□□ -2.03
TPRP12270 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TPRP12270 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TPRP12270 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TPRP12270 RNY1P14-201ENST00000384426 108 ntBASIC2.39□□□□□ -2.03
TPRP12270 RPS12P23-201ENST00000419579 400 ntBASIC2.39□□□□□ -2.03
TPRP12270 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.39□□□□□ -2.03
TPRP12270 GLRXP1-201ENST00000423261 334 ntBASIC2.39□□□□□ -2.03
TPRP12270 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.39□□□□□ -2.03
TPRP12270 AC004866.2-201ENST00000438285 481 ntBASIC2.39□□□□□ -2.03
TPRP12270 ST13P20-201ENST00000447996 1065 ntBASIC2.39□□□□□ -2.03
TPRP12270 AP001086.1-201ENST00000494882 321 ntBASIC2.39□□□□□ -2.03
TPRP12270 AC021146.1-201ENST00000511202 716 ntBASIC2.39□□□□□ -2.03
TPRP12270 RNA5SP281-201ENST00000516504 135 ntBASIC2.39□□□□□ -2.03
TPRP12270 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.39□□□□□ -2.03
TPRP12270 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.39□□□□□ -2.03
TPRP12270 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.39□□□□□ -2.03
TPRP12270 HMGB3P26-201ENST00000560051 582 ntBASIC2.39□□□□□ -2.03
TPRP12270 AC005296.1-201ENST00000616145 209 ntBASIC2.39□□□□□ -2.03
TPRP12270 OR1S1-201ENST00000624470 978 ntBASIC2.39□□□□□ -2.03
TPRP12270 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
TPRP12270 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.39□□□□□ -2.03
TPRP12270 RPL5P13-201ENST00000462840 709 ntBASIC2.39□□□□□ -2.03
TPRP12270 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
TPRP12270 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.39□□□□□ -2.03
TPRP12270 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.39□□□□□ -2.03
TPRP12270 AK6P1-201ENST00000540219 478 ntBASIC2.39□□□□□ -2.03
TPRP12270 AC007424.1-203ENST00000554613 687 ntBASIC2.39□□□□□ -2.03
TPRP12270 OR4T1P-201ENST00000554933 911 ntBASIC2.39□□□□□ -2.03
TPRP12270 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.39□□□□□ -2.03
TPRP12270 AC107871.2-201ENST00000612894 502 ntBASIC2.39□□□□□ -2.03
TPRP12270 AC106730.3-201ENST00000624568 641 ntBASIC2.39□□□□□ -2.03
TPRP12270 AL031985.3-201ENST00000565390 2449 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms