Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SNRPGP15-201ENST00000600149 222 ntBASIC2.58□□□□□ -2
CD28P10747 AC005776.1-201ENST00000603164 290 ntBASIC2.58□□□□□ -2
CD28P10747 AL365503.1-201ENST00000605247 905 ntBASIC2.58□□□□□ -2
CD28P10747 AC009464.1-201ENST00000615731 469 ntBASIC2.58□□□□□ -2
CD28P10747 AC022149.2-201ENST00000621061 203 ntBASIC2.58□□□□□ -2
CD28P10747 AC092628.2-201ENST00000622492 339 ntBASIC2.58□□□□□ -2
CD28P10747 AC068620.4-201ENST00000636730 1182 ntBASIC2.58□□□□□ -2
CD28P10747 AL365361.1-201ENST00000566942 3481 ntBASIC2.58□□□□□ -2
CD28P10747 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.58□□□□□ -2
CD28P10747 AL513302.2-201ENST00000562313 1842 ntBASIC2.58□□□□□ -2
CD28P10747 AC138915.3-201ENST00000562908 1389 ntBASIC2.58□□□□□ -2
CD28P10747 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
CD28P10747 AL592494.2-201ENST00000425455 1548 ntBASIC2.58□□□□□ -2
CD28P10747 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CD28P10747 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.57□□□□□ -2
CD28P10747 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.57□□□□□ -2
CD28P10747 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.57□□□□□ -2
CD28P10747 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.57□□□□□ -2
CD28P10747 Y_RNA.111-201ENST00000363248 100 ntBASIC2.57□□□□□ -2
CD28P10747 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CD28P10747 RNU6-354P-201ENST00000383862 107 ntBASIC2.57□□□□□ -2
CD28P10747 RNU6-610P-201ENST00000384264 107 ntBASIC2.57□□□□□ -2
CD28P10747 RNU6-921P-201ENST00000384361 107 ntBASIC2.57□□□□□ -2
CD28P10747 RNU6-441P-201ENST00000384545 106 ntBASIC2.57□□□□□ -2
CD28P10747 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CD28P10747 RPL31P12-201ENST00000422587 358 ntBASIC2.57□□□□□ -2
CD28P10747 RPP40P1-201ENST00000426762 456 ntBASIC2.57□□□□□ -2
CD28P10747 OR51B8P-201ENST00000449892 769 ntBASIC2.57□□□□□ -2
CD28P10747 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.57□□□□□ -2
CD28P10747 HMGN3P1-201ENST00000453847 193 ntBASIC2.57□□□□□ -2
CD28P10747 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.57□□□□□ -2
CD28P10747 AP001486.1-201ENST00000463339 476 ntBASIC2.57□□□□□ -2
CD28P10747 RPS3AP43-201ENST00000479743 781 ntBASIC2.57□□□□□ -2
CD28P10747 HMGB1P38-201ENST00000490557 577 ntBASIC2.57□□□□□ -2
CD28P10747 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.57□□□□□ -2
CD28P10747 RNA5SP341-201ENST00000516261 117 ntBASIC2.57□□□□□ -2
CD28P10747 RNU1-103P-201ENST00000516502 125 ntBASIC2.57□□□□□ -2
CD28P10747 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
CD28P10747 AC093331.1-201ENST00000521474 169 ntBASIC2.57□□□□□ -2
CD28P10747 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.57□□□□□ -2
CD28P10747 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.57□□□□□ -2
CD28P10747 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.57□□□□□ -2
CD28P10747 AC092470.1-201ENST00000546187 132 ntBASIC2.57□□□□□ -2
CD28P10747 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.57□□□□□ -2
CD28P10747 AC004024.1-201ENST00000549244 247 ntBASIC2.57□□□□□ -2
CD28P10747 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.57□□□□□ -2
CD28P10747 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.57□□□□□ -2
CD28P10747 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.57□□□□□ -2
CD28P10747 MTCO1P40-201ENST00000574371 625 ntBASIC2.57□□□□□ -2
CD28P10747 MIR4325-201ENST00000583049 90 ntBASIC2.57□□□□□ -2
CD28P10747 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.57□□□□□ -2
CD28P10747 AC098483.2-201ENST00000603158 454 ntBASIC2.57□□□□□ -2
CD28P10747 AC006254.3-201ENST00000603353 884 ntBASIC2.57□□□□□ -2
CD28P10747 AC073657.2-201ENST00000605661 303 ntBASIC2.57□□□□□ -2
CD28P10747 AL356321.1-201ENST00000621360 228 ntBASIC2.57□□□□□ -2
CD28P10747 AC048347.1-201ENST00000624621 427 ntBASIC2.57□□□□□ -2
CD28P10747 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.57□□□□□ -2
CD28P10747 AL355578.1-201ENST00000607405 1328 ntBASIC2.57□□□□□ -2
CD28P10747 AC117529.2-201ENST00000512159 2068 ntBASIC2.57□□□□□ -2
CD28P10747 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CD28P10747 CR383658.2-201ENST00000547576 1525 ntBASIC2.57□□□□□ -2
CD28P10747 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.57□□□□□ -2
CD28P10747 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.57□□□□□ -2
CD28P10747 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.56□□□□□ -2
CD28P10747 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.56□□□□□ -2
CD28P10747 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CD28P10747 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.56□□□□□ -2
CD28P10747 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
CD28P10747 EIF5P1-201ENST00000400019 1231 ntBASIC2.56□□□□□ -2
CD28P10747 SSXP10-201ENST00000402595 565 ntBASIC2.56□□□□□ -2
CD28P10747 GSTA8P-201ENST00000404253 637 ntBASIC2.56□□□□□ -2
CD28P10747 RNA5SP56-201ENST00000410277 118 ntBASIC2.56□□□□□ -2
CD28P10747 RNU6-55P-201ENST00000411092 107 ntBASIC2.56□□□□□ -2
CD28P10747 RNU6-954P-201ENST00000411355 107 ntBASIC2.56□□□□□ -2
CD28P10747 AC126124.2-201ENST00000413542 321 ntBASIC2.56□□□□□ -2
CD28P10747 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.56□□□□□ -2
CD28P10747 AC114973.1-201ENST00000429057 632 ntBASIC2.56□□□□□ -2
CD28P10747 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.56□□□□□ -2
CD28P10747 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.56□□□□□ -2
CD28P10747 MTCYBP31-201ENST00000438855 1122 ntBASIC2.56□□□□□ -2
CD28P10747 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.56□□□□□ -2
CD28P10747 AC008264.1-201ENST00000447612 367 ntBASIC2.56□□□□□ -2
CD28P10747 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.56□□□□□ -2
CD28P10747 HMGB3P8-201ENST00000449709 577 ntBASIC2.56□□□□□ -2
CD28P10747 NF1P3-201ENST00000457709 450 ntBASIC2.56□□□□□ -2
CD28P10747 SNORA59A-201ENST00000459326 152 ntBASIC2.56□□□□□ -2
CD28P10747 RNU7-140P-201ENST00000459546 60 ntBASIC2.56□□□□□ -2
CD28P10747 RN7SL330P-201ENST00000469709 307 ntBASIC2.56□□□□□ -2
CD28P10747 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.56□□□□□ -2
CD28P10747 AL049873.1-201ENST00000480540 376 ntBASIC2.56□□□□□ -2
CD28P10747 AC006445.1-201ENST00000491925 405 ntBASIC2.56□□□□□ -2
CD28P10747 FCF1P3-201ENST00000496394 590 ntBASIC2.56□□□□□ -2
CD28P10747 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.56□□□□□ -2
CD28P10747 OR5H5P-201ENST00000503164 928 ntBASIC2.56□□□□□ -2
CD28P10747 AC098799.1-201ENST00000504752 800 ntBASIC2.56□□□□□ -2
CD28P10747 HMGB1P22-201ENST00000505315 124 ntBASIC2.56□□□□□ -2
CD28P10747 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.56□□□□□ -2
CD28P10747 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.56□□□□□ -2
CD28P10747 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.56□□□□□ -2
CD28P10747 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms