Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AP003476.1-201ENST00000623984 516 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AC068724.3-201ENST00000625906 87 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQA1P01909 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1P01909 AC108206.1-201ENST00000570186 4159 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 AP004289.2-201ENST00000444413 1457 ntBASIC2.56□□□□□ -2
HLA-DQA1P01909 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1P01909 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1P01909 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQA1P01909 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQA1P01909 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA1P01909 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA1P01909 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1P01909 RNU6-761P-201ENST00000384148 107 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 RNU6-1257P-201ENST00000384625 110 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 SNORA46-201ENST00000384762 135 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 RNU6-298P-201ENST00000390888 96 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 RPL32P23-201ENST00000397237 405 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AL121972.1-201ENST00000402023 252 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1P01909 RNA5SP44-201ENST00000410446 133 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC245054.2-201ENST00000415639 319 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 EI24P1-201ENST00000416584 867 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC092634.6-201ENST00000418558 192 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 USP9YP21-201ENST00000420603 432 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 PTP4A1P7-201ENST00000423476 514 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC091390.1-201ENST00000433904 331 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC241584.1-201ENST00000438469 1241 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 RPL23AP16-201ENST00000441715 421 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 GAPDHP27-201ENST00000447427 1020 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 SLC31A1P1-201ENST00000451221 567 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1P01909 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1P01909 RPL31P13-201ENST00000484151 370 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 HMGB1P22-201ENST00000505315 124 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 HMGB3P15-201ENST00000507326 574 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC023141.12-201ENST00000512399 199 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 MTND4LP31-201ENST00000514859 294 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 RN7SKP21-201ENST00000516503 220 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 SNORA48.10-201ENST00000516965 160 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DQA1P01909 ZNF705CP-201ENST00000530515 889 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC090502.2-201ENST00000549267 280 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC053481.4-201ENST00000583164 216 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 MAGOH2P-202ENST00000584384 429 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 DNAJC19P3-201ENST00000594491 331 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC124312.4-201ENST00000605533 310 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AL591516.1-201ENST00000611326 274 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC032011.1-201ENST00000611703 1549 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AL592148.2-201ENST00000612210 372 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 AC073968.1-201ENST00000618594 637 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AL512506.2-201ENST00000624472 458 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQA1P01909 AC087821.2-201ENST00000637086 450 ntBASIC2.55□□□□□ -2
HLA-DQA1P01909 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.55□□□□□ -2
HLA-DQA1P01909 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA1P01909 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQA1P01909 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
HLA-DQA1P01909 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1P01909 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQA1P01909 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1P01909 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA1P01909 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1P01909 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1P01909 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1P01909 RNA5SP258-201ENST00000362750 119 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 RNU6-492P-201ENST00000363035 104 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 RNU6-707P-201ENST00000364647 95 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 RNU6-657P-201ENST00000383904 107 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 MIR607-201ENST00000385241 96 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 SOD2P1-201ENST00000396543 562 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 EIF5P1-201ENST00000400019 1231 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 PPIAP31-201ENST00000405422 495 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AL355143.1-201ENST00000407101 841 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 RN7SKP53-201ENST00000411337 315 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA1P01909 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AL139247.1-201ENST00000422768 325 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms