Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RPL7P24-201ENST00000493052 752 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC080014.1-201ENST00000496877 1201 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 RPL23AP55-201ENST00000498163 452 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC108941.1-201ENST00000502853 530 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC011352.3-201ENST00000505162 593 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC091860.1-201ENST00000505723 432 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFBP01127 MTCO3P44-201ENST00000510977 541 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC109471.1-201ENST00000511631 612 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 RNU6-1073P-201ENST00000517182 106 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 IGKV2D-23-201ENST00000518179 286 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.68□□□□□ -1.82
PDGFBP01127 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.68□□□□□ -1.82
PDGFBP01127 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
PDGFBP01127 MIR4672-201ENST00000583126 81 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AL583856.2-201ENST00000606298 543 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 U4.6-201ENST00000621618 127 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 AL773545.4-201ENST00000637262 310 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 AL513478.4-201ENST00000641636 310 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFBP01127 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PDGFBP01127 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFBP01127 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.68□□□□□ -1.82
PDGFBP01127 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PDGFBP01127 AP001148.1-201ENST00000624124 2359 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 AP001486.2-201ENST00000561652 5113 ntBASIC3.68□□□□□ -1.82
PDGFBP01127 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
PDGFBP01127 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PDGFBP01127 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFBP01127 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.67□□□□□ -1.82
PDGFBP01127 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.67□□□□□ -1.82
PDGFBP01127 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.67□□□□□ -1.82
PDGFBP01127 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PDGFBP01127 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PDGFBP01127 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PDGFBP01127 ARF4P3-201ENST00000397387 509 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFBP01127 MTCO3P12-201ENST00000416718 547 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 MRPS18BP2-201ENST00000434310 759 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.67□□□□□ -1.82
PDGFBP01127 VN1R25P-201ENST00000443385 738 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 RPS24P6-201ENST00000452670 400 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 VN1R40P-201ENST00000455196 941 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFBP01127 AC096571.1-202ENST00000506634 735 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFBP01127 AC008837.1-201ENST00000511513 412 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 RN7SKP244-201ENST00000516513 307 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 snoZ278.1-201ENST00000517059 112 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFBP01127 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFBP01127 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFBP01127 MTCYBP23-201ENST00000558717 1102 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.67□□□□□ -1.82
PDGFBP01127 AC093519.1-201ENST00000566109 298 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 MIR4666A-201ENST00000580160 79 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 AL445435.1-201ENST00000604232 665 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.67□□□□□ -1.82
PDGFBP01127 AC093673.2-201ENST00000609674 331 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 MIR7851-201ENST00000610611 160 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 MIR6715A-201ENST00000615929 79 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 AC073968.1-201ENST00000618594 637 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 AC130650.2-201ENST00000618736 2403 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFBP01127 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PDGFBP01127 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PDGFBP01127 AC004925.1-201ENST00000624256 2706 ntBASIC3.67□□□□□ -1.82
PDGFBP01127 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFBP01127 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.67□□□□□ -1.82
PDGFBP01127 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PDGFBP01127 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFBP01127 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFBP01127 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PDGFBP01127 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFBP01127 RNU6-263P-201ENST00000363811 107 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 SNORD74.4-201ENST00000364129 80 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AL583834.1-201ENST00000406943 343 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFBP01127 AIMP1P1-201ENST00000418670 937 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFBP01127 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFBP01127 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFBP01127 NANOGP6-201ENST00000429190 847 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFBP01127 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFBP01127 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFBP01127 EXTL2P1-201ENST00000446218 416 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 Z75741.1-201ENST00000446793 314 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms