Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MTCO1P12-201ENST00000414273 1543 ntBASIC2.06□□□□□ -2.08
SIX6O95475 AC007336.1-201ENST00000576365 3828 ntBASIC2.05□□□□□ -2.08
SIX6O95475 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SIX6O95475 AL139276.1-201ENST00000311910 1001 ntBASIC2.05□□□□□ -2.08
SIX6O95475 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SIX6O95475 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SIX6O95475 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SIX6O95475 MIR141-201ENST00000384975 95 ntBASIC2.05□□□□□ -2.08
SIX6O95475 MIR320B1-201ENST00000390209 79 ntBASIC2.05□□□□□ -2.08
SIX6O95475 LINC01881-201ENST00000416103 412 ntBASIC2.05□□□□□ -2.08
SIX6O95475 FNDC3CP-201ENST00000420795 1155 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SIX6O95475 AC241520.1-201ENST00000422654 1099 ntBASIC2.05□□□□□ -2.08
SIX6O95475 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SIX6O95475 LSM1P1-201ENST00000438629 273 ntBASIC2.05□□□□□ -2.08
SIX6O95475 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX6O95475 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX6O95475 AC023424.2-201ENST00000493479 777 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX6O95475 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX6O95475 RN7SKP57-201ENST00000517248 293 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AP003102.1-201ENST00000525638 661 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.05□□□□□ -2.08
SIX6O95475 CYCSP39-201ENST00000565821 309 ntBASIC2.05□□□□□ -2.08
SIX6O95475 MIR5194-201ENST00000582634 120 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AC061975.8-201ENST00000587058 721 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AC245128.3-201ENST00000594721 748 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AC007620.3-201ENST00000608131 497 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AC006023.2-201ENST00000609916 167 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AC034102.8-201ENST00000615146 484 ntBASIC2.05□□□□□ -2.08
SIX6O95475 AP004607.9-201ENST00000618202 316 ntBASIC2.05□□□□□ -2.08
SIX6O95475 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SIX6O95475 AC092159.4-201ENST00000624944 550 ntBASIC2.05□□□□□ -2.08
SIX6O95475 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SIX6O95475 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX6O95475 AC244517.1-201ENST00000606030 2086 ntBASIC2.05□□□□□ -2.08
SIX6O95475 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SIX6O95475 MIRLET7G-201ENST00000362280 84 ntBASIC2.04□□□□□ -2.08
SIX6O95475 U3.19-201ENST00000390893 196 ntBASIC2.04□□□□□ -2.08
SIX6O95475 RPS4XP7-201ENST00000406274 780 ntBASIC2.04□□□□□ -2.08
SIX6O95475 SNORA11C-201ENST00000408532 129 ntBASIC2.04□□□□□ -2.08
SIX6O95475 AC109780.2-201ENST00000413467 845 ntBASIC2.04□□□□□ -2.08
SIX6O95475 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.04□□□□□ -2.08
SIX6O95475 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.04□□□□□ -2.08
SIX6O95475 AL591503.2-201ENST00000442314 1005 ntBASIC2.04□□□□□ -2.08
SIX6O95475 AL671855.1-201ENST00000446875 1203 ntBASIC2.04□□□□□ -2.08
SIX6O95475 RPL7L1P13-201ENST00000511702 739 ntBASIC2.04□□□□□ -2.08
SIX6O95475 RNU1-104P-201ENST00000517280 175 ntBASIC2.04□□□□□ -2.08
SIX6O95475 AC023632.4-201ENST00000517783 191 ntBASIC2.04□□□□□ -2.08
SIX6O95475 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.04□□□□□ -2.08
SIX6O95475 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.04□□□□□ -2.08
SIX6O95475 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.04□□□□□ -2.08
SIX6O95475 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.04□□□□□ -2.08
SIX6O95475 OR6C73P-201ENST00000546432 358 ntBASIC2.04□□□□□ -2.08
SIX6O95475 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SIX6O95475 MIR5004-201ENST00000579078 107 ntBASIC2.04□□□□□ -2.08
SIX6O95475 AC073387.2-201ENST00000604797 784 ntBASIC2.04□□□□□ -2.08
SIX6O95475 AL161912.3-201ENST00000605404 628 ntBASIC2.04□□□□□ -2.08
SIX6O95475 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.04□□□□□ -2.08
SIX6O95475 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
SIX6O95475 ATP5A1P2-202ENST00000616464 443 ntBASIC2.04□□□□□ -2.08
SIX6O95475 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SIX6O95475 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.04□□□□□ -2.08
SIX6O95475 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.04□□□□□ -2.08
SIX6O95475 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.04□□□□□ -2.08
SIX6O95475 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SIX6O95475 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SIX6O95475 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SIX6O95475 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SIX6O95475 AC087565.3-202ENST00000642085 1603 ntBASIC2.03□□□□□ -2.08
SIX6O95475 MTCO1P24-201ENST00000515438 1558 ntBASIC2.03□□□□□ -2.08
SIX6O95475 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.03□□□□□ -2.08
SIX6O95475 AP002907.1-201ENST00000606361 1430 ntBASIC2.03□□□□□ -2.08
SIX6O95475 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SIX6O95475 AL136520.1-201ENST00000600311 1322 ntBASIC2.03□□□□□ -2.08
SIX6O95475 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SIX6O95475 AL356057.2-201ENST00000403318 432 ntBASIC2.03□□□□□ -2.08
SIX6O95475 RNA5SP21-201ENST00000410917 96 ntBASIC2.03□□□□□ -2.08
SIX6O95475 RNU2-25P-201ENST00000411041 191 ntBASIC2.03□□□□□ -2.08
SIX6O95475 AL158825.1-201ENST00000414735 521 ntBASIC2.03□□□□□ -2.08
SIX6O95475 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SIX6O95475 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.03□□□□□ -2.08
SIX6O95475 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.03□□□□□ -2.08
SIX6O95475 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.03□□□□□ -2.08
SIX6O95475 PDSS1P2-201ENST00000449397 678 ntBASIC2.03□□□□□ -2.08
SIX6O95475 NF1P3-201ENST00000457709 450 ntBASIC2.03□□□□□ -2.08
SIX6O95475 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.03□□□□□ -2.08
SIX6O95475 CEACAMP10-202ENST00000495431 496 ntBASIC2.03□□□□□ -2.08
SIX6O95475 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.03□□□□□ -2.08
SIX6O95475 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.03□□□□□ -2.08
SIX6O95475 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.03□□□□□ -2.08
SIX6O95475 AC110792.2-201ENST00000510278 224 ntBASIC2.03□□□□□ -2.08
SIX6O95475 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.03□□□□□ -2.08
SIX6O95475 AC093755.1-201ENST00000512950 1023 ntBASIC2.03□□□□□ -2.08
SIX6O95475 SNORA31.21-201ENST00000517180 77 ntBASIC2.03□□□□□ -2.08
SIX6O95475 RNU6-711P-201ENST00000517255 106 ntBASIC2.03□□□□□ -2.08
SIX6O95475 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.03□□□□□ -2.08
SIX6O95475 AC104115.2-201ENST00000523026 687 ntBASIC2.03□□□□□ -2.08
SIX6O95475 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.03□□□□□ -2.08
SIX6O95475 H3F3AP1-201ENST00000559984 334 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms