Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 OR8X1P-201ENST00000534542 869 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP4O75161 AC007424.1-203ENST00000554613 687 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 AL845331.3-202ENST00000562856 261 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 U4.3-201ENST00000621047 82 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP4O75161 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP4O75161 AC117529.2-201ENST00000512159 2068 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP4O75161 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.7□□□□□ -1.82
NPHP4O75161 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP4O75161 AC011155.1-201ENST00000316512 456 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.7□□□□□ -1.82
NPHP4O75161 PTP4A1P5-201ENST00000420305 455 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.7□□□□□ -1.82
NPHP4O75161 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP4O75161 AC093278.1-201ENST00000494700 600 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 CKS1BP2-201ENST00000497342 240 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 RNU6-347P-201ENST00000516658 105 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 VTA1P2-201ENST00000520205 911 ntBASIC3.7□□□□□ -1.82
NPHP4O75161 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.7□□□□□ -1.82
NPHP4O75161 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP4O75161 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.69□□□□□ -1.82
NPHP4O75161 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP4O75161 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP4O75161 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP4O75161 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP4O75161 MIR148B-201ENST00000362252 99 ntBASIC3.69□□□□□ -1.82
NPHP4O75161 AC107081.1-201ENST00000414975 361 ntBASIC3.69□□□□□ -1.82
NPHP4O75161 RPLP0P7-201ENST00000416050 667 ntBASIC3.69□□□□□ -1.82
NPHP4O75161 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.69□□□□□ -1.82
NPHP4O75161 CALM1P2-201ENST00000452941 448 ntBASIC3.69□□□□□ -1.82
NPHP4O75161 HMGN2P23-201ENST00000456759 269 ntBASIC3.69□□□□□ -1.82
NPHP4O75161 RN7SL636P-201ENST00000497504 294 ntBASIC3.69□□□□□ -1.82
NPHP4O75161 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NPHP4O75161 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.69□□□□□ -1.82
NPHP4O75161 OR11H5P-201ENST00000554039 926 ntBASIC3.69□□□□□ -1.82
NPHP4O75161 AC034236.3-201ENST00000605999 461 ntBASIC3.69□□□□□ -1.82
NPHP4O75161 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP4O75161 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP4O75161 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP4O75161 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
NPHP4O75161 SYT14P1-202ENST00000600441 1448 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP4O75161 AC110792.3-201ENST00000595906 1614 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AC240504.1-201ENST00000395709 845 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP4O75161 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.68□□□□□ -1.82
NPHP4O75161 OR7L1P-201ENST00000456181 380 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 RPL30P9-201ENST00000465586 330 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AC108471.1-201ENST00000513977 287 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AC245166.1-201ENST00000521012 253 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP4O75161 RANP3-201ENST00000530970 276 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AP000867.2-201ENST00000532468 320 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP4O75161 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 CBX3P5-201ENST00000552017 521 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHP4O75161 AC007423.1-201ENST00000605009 627 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 AC010338.1-201ENST00000621823 717 ntBASIC3.68□□□□□ -1.82
NPHP4O75161 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP4O75161 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP4O75161 AC093831.2-201ENST00000624393 3427 ntBASIC3.67□□□□□ -1.82
NPHP4O75161 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHP4O75161 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP4O75161 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHP4O75161 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
NPHP4O75161 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NPHP4O75161 AC004987.3-201ENST00000413879 771 ntBASIC3.67□□□□□ -1.82
NPHP4O75161 AC245054.2-201ENST00000415639 319 ntBASIC3.67□□□□□ -1.82
NPHP4O75161 AC099336.2-201ENST00000422457 254 ntBASIC3.67□□□□□ -1.82
NPHP4O75161 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP4O75161 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHP4O75161 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.67□□□□□ -1.82
NPHP4O75161 RN7SL75P-201ENST00000461926 281 ntBASIC3.67□□□□□ -1.82
NPHP4O75161 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.67□□□□□ -1.82
NPHP4O75161 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.67□□□□□ -1.82
NPHP4O75161 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHP4O75161 AADACP1-206ENST00000561502 1193 ntBASIC3.67□□□□□ -1.82
NPHP4O75161 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.67□□□□□ -1.82
NPHP4O75161 AC009163.5-201ENST00000575421 637 ntBASIC3.67□□□□□ -1.82
NPHP4O75161 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.67□□□□□ -1.82
NPHP4O75161 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.67□□□□□ -1.82
NPHP4O75161 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPHP4O75161 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NPHP4O75161 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHP4O75161 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPHP4O75161 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPHP4O75161 RNU6-1251P-201ENST00000364502 107 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 MTCO1P39-201ENST00000426148 480 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 RPS12P2-201ENST00000439728 269 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 VN1R48P-201ENST00000448149 1036 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 RPL31P20-201ENST00000449593 360 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 AC008280.2-201ENST00000455473 307 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 RPL21P71-201ENST00000465598 459 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 AC118282.1-201ENST00000506408 765 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 AC234781.5-201ENST00000508429 271 ntBASIC3.66□□□□□ -1.82
NPHP4O75161 AC147055.1-201ENST00000509261 750 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms