Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC106028.5-201ENST00000610332 395 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AL356596.1-201ENST00000624230 379 ntBASIC3.67□□□□□ -1.82
PRKNO60260 AC098679.4-201ENST00000624241 654 ntBASIC3.67□□□□□ -1.82
PRKNO60260 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKNO60260 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRKNO60260 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.67□□□□□ -1.82
PRKNO60260 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.67□□□□□ -1.82
PRKNO60260 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKNO60260 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKNO60260 AC068254.2-201ENST00000623938 3577 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKNO60260 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKNO60260 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PRKNO60260 MIR134-201ENST00000385258 73 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC007066.1-201ENST00000392902 381 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC004022.2-201ENST00000413824 193 ntBASIC3.66□□□□□ -1.82
PRKNO60260 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.66□□□□□ -1.82
PRKNO60260 Z99497.1-201ENST00000421282 135 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKNO60260 AC096632.1-201ENST00000427395 310 ntBASIC3.66□□□□□ -1.82
PRKNO60260 RPL7P2-201ENST00000427639 268 ntBASIC3.66□□□□□ -1.82
PRKNO60260 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKNO60260 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.66□□□□□ -1.82
PRKNO60260 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKNO60260 EEF1E1P1-201ENST00000446998 430 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.66□□□□□ -1.82
PRKNO60260 RPL39P6-201ENST00000448289 150 ntBASIC3.66□□□□□ -1.82
PRKNO60260 USP9YP10-201ENST00000454868 628 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC087879.1-201ENST00000474343 374 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AP000893.1-201ENST00000474462 794 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC109486.1-201ENST00000486833 374 ntBASIC3.66□□□□□ -1.82
PRKNO60260 RPL31P61-201ENST00000496160 376 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.66□□□□□ -1.82
PRKNO60260 PRELID3BP7-201ENST00000503606 469 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC010424.1-201ENST00000506336 297 ntBASIC3.66□□□□□ -1.82
PRKNO60260 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.66□□□□□ -1.82
PRKNO60260 AC110792.2-201ENST00000510278 224 ntBASIC3.66□□□□□ -1.82
PRKNO60260 USP9YP5-201ENST00000511770 630 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.66□□□□□ -1.82
PRKNO60260 RNU6-150P-201ENST00000516237 95 ntBASIC3.66□□□□□ -1.82
PRKNO60260 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PRKNO60260 AC087369.1-201ENST00000520775 996 ntBASIC3.66□□□□□ -1.82
PRKNO60260 OR4A12P-201ENST00000530847 918 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC092851.1-201ENST00000535964 478 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKNO60260 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.66□□□□□ -1.82
PRKNO60260 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
PRKNO60260 RSL24D1P11-201ENST00000591045 491 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC119751.7-201ENST00000600494 245 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC073544.2-201ENST00000601155 540 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC064872.1-201ENST00000604823 1072 ntBASIC3.66□□□□□ -1.82
PRKNO60260 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.66□□□□□ -1.82
PRKNO60260 AC122108.2-201ENST00000611946 526 ntBASIC3.66□□□□□ -1.82
PRKNO60260 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PRKNO60260 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRKNO60260 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRKNO60260 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PRKNO60260 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.65□□□□□ -1.82
PRKNO60260 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PRKNO60260 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
PRKNO60260 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
PRKNO60260 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PRKNO60260 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.65□□□□□ -1.82
PRKNO60260 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.82
PRKNO60260 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
PRKNO60260 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.65□□□□□ -1.82
PRKNO60260 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PRKNO60260 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.65□□□□□ -1.83
PRKNO60260 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 RNU6-623P-201ENST00000363143 105 ntBASIC3.65□□□□□ -1.83
PRKNO60260 RNU6-433P-201ENST00000363216 104 ntBASIC3.65□□□□□ -1.83
PRKNO60260 U3.4-201ENST00000363352 213 ntBASIC3.65□□□□□ -1.83
PRKNO60260 RNU1-64P-201ENST00000365443 163 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 SNORD116-4-201ENST00000384733 96 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AL121972.1-201ENST00000402023 252 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AL023807.1-201ENST00000407932 359 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AC092647.1-201ENST00000420654 287 ntBASIC3.65□□□□□ -1.83
PRKNO60260 DLGAP5P1-201ENST00000430307 464 ntBASIC3.65□□□□□ -1.83
PRKNO60260 MTCO3P5-201ENST00000433620 714 ntBASIC3.65□□□□□ -1.83
PRKNO60260 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKNO60260 RPL23AP16-201ENST00000441715 421 ntBASIC3.65□□□□□ -1.83
PRKNO60260 RPS26P56-201ENST00000444468 240 ntBASIC3.65□□□□□ -1.83
PRKNO60260 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.65□□□□□ -1.83
PRKNO60260 AL445669.2-201ENST00000454425 421 ntBASIC3.65□□□□□ -1.83
PRKNO60260 MTCO2P18-201ENST00000457151 658 ntBASIC3.65□□□□□ -1.83
PRKNO60260 RPL30P9-201ENST00000465586 330 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AC005726.1-201ENST00000494679 427 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.65□□□□□ -1.83
PRKNO60260 MTATP6P22-201ENST00000507369 598 ntBASIC3.65□□□□□ -1.83
PRKNO60260 MTND4P2-201ENST00000507767 1203 ntBASIC3.65□□□□□ -1.83
PRKNO60260 NPM1P41-201ENST00000512920 831 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms