Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RNU4-35P-201ENST00000362588 141 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 RNU6-1074P-201ENST00000383995 104 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 MTND4P13-201ENST00000402078 1023 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 ATP5F1P6-201ENST00000402768 767 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 RNA5SP317-201ENST00000410176 116 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 RNA5SP311-201ENST00000411290 116 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.52□□□□□ -2.01
SSNA1O43805 PAICSP7-201ENST00000419829 962 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AL035423.1-201ENST00000420331 213 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SSNA1O43805 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.52□□□□□ -2.01
SSNA1O43805 YY1P1-201ENST00000427625 668 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.52□□□□□ -2.01
SSNA1O43805 CYCSP42-201ENST00000450823 238 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC104073.1-201ENST00000451988 151 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 ELOCP23-201ENST00000452014 332 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC234775.1-201ENST00000454247 670 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 RN7SL601P-201ENST00000471221 293 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.52□□□□□ -2.01
SSNA1O43805 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.52□□□□□ -2.01
SSNA1O43805 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.52□□□□□ -2.01
SSNA1O43805 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.52□□□□□ -2.01
SSNA1O43805 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSNA1O43805 RAC1P5-201ENST00000512182 576 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.52□□□□□ -2.01
SSNA1O43805 PRELID3BP4-201ENST00000515476 571 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 RNA5SP315-201ENST00000516340 116 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 RNA5SP312-201ENST00000517068 116 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.52□□□□□ -2.01
SSNA1O43805 AC027104.1-201ENST00000563702 681 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.52□□□□□ -2.01
SSNA1O43805 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSNA1O43805 MIR2682-201ENST00000580305 110 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.52□□□□□ -2.01
SSNA1O43805 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 MIR6875-201ENST00000617506 72 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC007275.1-201ENST00000621243 671 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC010338.1-201ENST00000621823 717 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC020763.5-201ENST00000623298 430 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC009039.2-201ENST00000624524 529 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AP003400.6-201ENST00000624698 740 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.52□□□□□ -2.01
SSNA1O43805 RNA5SP196-201ENST00000625967 102 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 FRG1DP-201ENST00000635586 771 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 AL590396.2-201ENST00000636511 1041 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.52□□□□□ -2.01
SSNA1O43805 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSNA1O43805 AP003122.5-201ENST00000527668 3766 ntBASIC2.52□□□□□ -2.01
SSNA1O43805 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.52□□□□□ -2.01
SSNA1O43805 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSNA1O43805 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSNA1O43805 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSNA1O43805 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.51□□□□□ -2.01
SSNA1O43805 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSNA1O43805 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SSNA1O43805 RNU6-1339P-201ENST00000363574 91 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 SNORD56.5-201ENST00000364281 72 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSNA1O43805 AC025750.1-201ENST00000399891 379 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 TAF9BP2-201ENST00000400856 499 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 MTND4LP20-201ENST00000402379 270 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 FO393413.1-201ENST00000402892 195 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 GSTA8P-201ENST00000404253 637 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 HMGB3P31-201ENST00000413333 595 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.51□□□□□ -2.01
SSNA1O43805 AL035410.1-201ENST00000427409 427 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 CYCSP4-201ENST00000429682 331 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 ATP5JP1-201ENST00000431631 322 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 PTP4A1P3-201ENST00000433661 420 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 RPS26P30-201ENST00000443431 335 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 SBDSP1-204ENST00000453858 737 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.51□□□□□ -2.01
SSNA1O43805 OR9N1P-202ENST00000494289 481 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 CBX3P3-201ENST00000508108 532 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.51□□□□□ -2.01
SSNA1O43805 TBCAP3-201ENST00000512475 312 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.51□□□□□ -2.01
SSNA1O43805 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.51□□□□□ -2.01
SSNA1O43805 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.51□□□□□ -2.01
SSNA1O43805 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 AC034105.3-201ENST00000565294 442 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
SSNA1O43805 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.51□□□□□ -2.01
SSNA1O43805 AC020895.1-201ENST00000595362 272 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AL355812.1-201ENST00000603215 216 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AC015849.2-201ENST00000605738 409 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AC211433.2-201ENST00000608433 387 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AC008083.4-201ENST00000615076 444 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AC073968.1-201ENST00000618594 637 ntBASIC2.51□□□□□ -2.01
SSNA1O43805 AC015967.1-201ENST00000619893 476 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms