Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RPS29P4-201ENST00000414733 161 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN1O15353 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN1O15353 SKP1P3-201ENST00000429280 487 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXN1O15353 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXN1O15353 MTND3P21-201ENST00000433774 331 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 MTCO3P18-201ENST00000440206 761 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXN1O15353 U8.18-201ENST00000459285 133 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 AC012158.1-204ENST00000483430 465 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN1O15353 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
FOXN1O15353 AC109445.1-201ENST00000512356 383 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN1O15353 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXN1O15353 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXN1O15353 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXN1O15353 RPL23AP97-201ENST00000568955 471 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 SNORD39.2-201ENST00000579995 76 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
FOXN1O15353 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN1O15353 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN1O15353 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FOXN1O15353 AC087821.2-201ENST00000637086 450 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN1O15353 MTND4P12-201ENST00000498999 1377 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
FOXN1O15353 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FOXN1O15353 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FOXN1O15353 AC139713.2-215ENST00000641428 5037 ntBASIC4.98□□□□□ -1.61
FOXN1O15353 AL157700.1-201ENST00000561973 1432 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN1O15353 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN1O15353 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN1O15353 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN1O15353 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
FOXN1O15353 PROS2P-201ENST00000474651 1951 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN1O15353 AC138393.1-206ENST00000540997 1886 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 TEX21P-201ENST00000447107 1476 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 OR4A15-201ENST00000314706 1035 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 RNA5SP307-201ENST00000362863 116 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 MIR181A1-201ENST00000385026 110 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
FOXN1O15353 AL034403.1-201ENST00000399414 885 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AL078604.1-201ENST00000404609 466 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 RPS20P14-201ENST00000412545 360 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC062016.2-201ENST00000420950 676 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN1O15353 AL157831.1-201ENST00000426134 473 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 MTND1P28-201ENST00000435623 950 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC092170.1-201ENST00000440211 356 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN1O15353 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN1O15353 AC079776.3-201ENST00000450665 370 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN1O15353 RPL23AP65-201ENST00000475608 468 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 RPL9P6-201ENST00000492764 598 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN1O15353 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN1O15353 RN7SKP298-201ENST00000515950 94 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC008694.2-201ENST00000517591 306 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC092747.2-201ENST00000545069 983 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN1O15353 GTF2IP22-201ENST00000554443 182 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC044792.1-201ENST00000593294 196 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN1O15353 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN1O15353 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN1O15353 AL390816.3-201ENST00000604527 1066 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AL022154.1-201ENST00000604698 785 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AL137843.1-201ENST00000605078 385 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC011374.2-201ENST00000607135 526 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AP000238.1-201ENST00000608759 426 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXN1O15353 MIR7154-201ENST00000620673 73 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC112204.3-201ENST00000623822 332 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 CR381653.2-201ENST00000624041 768 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 AC055839.1-201ENST00000634467 498 ntBASIC4.97□□□□□ -1.61
FOXN1O15353 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.97□□□□□ -1.61
FOXN1O15353 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN1O15353 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
FOXN1O15353 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN1O15353 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN1O15353 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN1O15353 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXN1O15353 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXN1O15353 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.96□□□□□ -1.61
FOXN1O15353 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
FOXN1O15353 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.96□□□□□ -1.62
FOXN1O15353 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
FOXN1O15353 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXN1O15353 OR11H4-201ENST00000315409 1082 ntBASIC4.96□□□□□ -1.62
FOXN1O15353 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
FOXN1O15353 Y_RNA.18-201ENST00000362461 102 ntBASIC4.96□□□□□ -1.62
FOXN1O15353 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.96□□□□□ -1.62
FOXN1O15353 RN7SKP226-201ENST00000364912 300 ntBASIC4.96□□□□□ -1.62
FOXN1O15353 MIR142-201ENST00000384835 87 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms