Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC103710.3-201ENST00000608157 948 ntBASIC3.85□□□□□ -1.79
O00370 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.85□□□□□ -1.79
O00370 AC140725.3-201ENST00000616193 880 ntBASIC3.85□□□□□ -1.79
O00370 AC009159.2-201ENST00000617603 606 ntBASIC3.85□□□□□ -1.79
O00370 AL157770.1-201ENST00000623049 439 ntBASIC3.85□□□□□ -1.79
O00370 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
O00370 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
O00370 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.85□□□□□ -1.79
O00370 AC090337.1-201ENST00000579651 2074 ntBASIC3.85□□□□□ -1.79
O00370 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
O00370 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
O00370 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
O00370 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
O00370 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
O00370 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
O00370 RNU6-115P-201ENST00000364310 107 ntBASIC3.84□□□□□ -1.79
O00370 SNORD116.1-201ENST00000365628 92 ntBASIC3.84□□□□□ -1.79
O00370 SNORD116-23-201ENST00000384645 92 ntBASIC3.84□□□□□ -1.79
O00370 MIR554-201ENST00000384874 96 ntBASIC3.84□□□□□ -1.79
O00370 RNU6-1300P-201ENST00000391046 108 ntBASIC3.84□□□□□ -1.79
O00370 AL121972.1-201ENST00000402023 252 ntBASIC3.84□□□□□ -1.79
O00370 MTCO3P31-201ENST00000405526 789 ntBASIC3.84□□□□□ -1.79
O00370 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.84□□□□□ -1.79
O00370 AL161449.1-201ENST00000414531 1199 ntBASIC3.84□□□□□ -1.79
O00370 SYF2P2-201ENST00000417620 583 ntBASIC3.84□□□□□ -1.79
O00370 BOLA3P4-201ENST00000418151 400 ntBASIC3.84□□□□□ -1.79
O00370 AC008280.1-201ENST00000418851 412 ntBASIC3.84□□□□□ -1.79
O00370 AC007435.1-201ENST00000421086 415 ntBASIC3.84□□□□□ -1.79
O00370 MTCO3P1-205ENST00000422088 832 ntBASIC3.84□□□□□ -1.79
O00370 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.84□□□□□ -1.79
O00370 SDCBPP2-201ENST00000424643 885 ntBASIC3.84□□□□□ -1.79
O00370 AC018644.1-201ENST00000429934 551 ntBASIC3.84□□□□□ -1.79
O00370 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
O00370 ELOCP13-201ENST00000443934 329 ntBASIC3.84□□□□□ -1.79
O00370 RPS26P56-201ENST00000444468 240 ntBASIC3.84□□□□□ -1.79
O00370 Z95327.1-201ENST00000446082 482 ntBASIC3.84□□□□□ -1.79
O00370 AC007327.1-201ENST00000447461 264 ntBASIC3.84□□□□□ -1.79
O00370 RPS3AP46-201ENST00000448352 682 ntBASIC3.84□□□□□ -1.79
O00370 AC010655.1-201ENST00000449336 292 ntBASIC3.84□□□□□ -1.79
O00370 AC006539.3-201ENST00000454258 129 ntBASIC3.84□□□□□ -1.79
O00370 CFTRP1-201ENST00000456646 183 ntBASIC3.84□□□□□ -1.79
O00370 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.79
O00370 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
O00370 HMGN1P11-201ENST00000508668 303 ntBASIC3.84□□□□□ -1.79
O00370 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.84□□□□□ -1.79
O00370 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.84□□□□□ -1.79
O00370 MTCYBP41-201ENST00000528913 1123 ntBASIC3.84□□□□□ -1.79
O00370 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.84□□□□□ -1.79
O00370 AL158211.1-201ENST00000566763 763 ntBASIC3.84□□□□□ -1.79
O00370 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.84□□□□□ -1.79
O00370 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.84□□□□□ -1.79
O00370 AC022022.2-201ENST00000602989 360 ntBASIC3.84□□□□□ -1.79
O00370 IGHV3-29-201ENST00000604817 344 ntBASIC3.84□□□□□ -1.79
O00370 MIR92B-201ENST00000607575 96 ntBASIC3.84□□□□□ -1.79
O00370 AC007349.4-201ENST00000608114 532 ntBASIC3.84□□□□□ -1.79
O00370 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 AC092954.1-201ENST00000609121 445 ntBASIC3.84□□□□□ -1.79
O00370 AC022509.4-201ENST00000621404 572 ntBASIC3.84□□□□□ -1.79
O00370 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 AC012442.3-202ENST00000636742 206 ntBASIC3.84□□□□□ -1.79
O00370 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
O00370 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.84□□□□□ -1.79
O00370 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.84□□□□□ -1.79
O00370 AL732372.2-225ENST00000642124 456 ntBASIC3.84□□□□□ -1.79
O00370 AC058791.1-201ENST00000608412 3198 ntBASIC3.84□□□□□ -1.79
O00370 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
O00370 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
O00370 AC007823.1-201ENST00000569932 1566 ntBASIC3.84□□□□□ -1.8
O00370 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
O00370 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
O00370 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
O00370 AL161912.2-201ENST00000565707 3007 ntBASIC3.84□□□□□ -1.8
O00370 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
O00370 AC106871.1-201ENST00000568324 3102 ntBASIC3.84□□□□□ -1.8
O00370 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.83□□□□□ -1.8
O00370 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
O00370 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
O00370 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
O00370 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
O00370 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
O00370 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
O00370 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
O00370 SNORD9-201ENST00000362566 104 ntBASIC3.83□□□□□ -1.8
O00370 RNU6-1066P-201ENST00000363573 105 ntBASIC3.83□□□□□ -1.8
O00370 RNU6-374P-201ENST00000364146 108 ntBASIC3.83□□□□□ -1.8
O00370 RNA5SP42-201ENST00000364278 115 ntBASIC3.83□□□□□ -1.8
O00370 SNORA7.2-201ENST00000364446 145 ntBASIC3.83□□□□□ -1.8
O00370 SNORA5A-201ENST00000384111 134 ntBASIC3.83□□□□□ -1.8
O00370 MIR217-201ENST00000384817 110 ntBASIC3.83□□□□□ -1.8
O00370 MT-TC-201ENST00000387405 66 ntBASIC3.83□□□□□ -1.8
O00370 SSXP10-201ENST00000402595 565 ntBASIC3.83□□□□□ -1.8
O00370 AL138880.1-201ENST00000405824 642 ntBASIC3.83□□□□□ -1.8
O00370 AL590084.1-201ENST00000407885 387 ntBASIC3.83□□□□□ -1.8
O00370 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms