Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC188H7C350 MRPL49P2-201ENST00000521066 465 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC188H7C350 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC188H7C350 BNIP3P5-201ENST00000562290 498 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AL512347.1-201ENST00000566420 503 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC120057.2-201ENST00000571520 271 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC188H7C350 AC004987.4-201ENST00000603383 338 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 MIR6867-201ENST00000610636 67 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 MIR6500-201ENST00000622700 86 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC110801.1-201ENST00000623590 212 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 CR381572.1-201ENST00000625098 102 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 AC116618.1-201ENST00000634617 774 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 MIR492-201ENST00000638676 116 ntBASIC3.78□□□□□ -1.8
CCDC188H7C350 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC188H7C350 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC188H7C350 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC188H7C350 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC188H7C350 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CCDC188H7C350 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC188H7C350 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC188H7C350 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 MIR30E-201ENST00000362104 92 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 SNORA31-201ENST00000362607 130 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AP002088.1-201ENST00000382740 395 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC188H7C350 ERHP2-201ENST00000402323 299 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC068533.1-201ENST00000418542 415 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC019178.2-201ENST00000423595 505 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC188H7C350 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC188H7C350 RPL12P26-201ENST00000452430 487 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC188H7C350 MTCYBP17-201ENST00000503579 789 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AC110768.1-201ENST00000509222 400 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 RN7SKP31-201ENST00000516354 278 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 SNORA31.20-201ENST00000517111 133 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC188H7C350 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC188H7C350 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC109635.4-202ENST00000531666 412 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC188H7C350 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC126177.3-201ENST00000551839 688 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AC007687.1-201ENST00000602704 304 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 RPL23AP92-201ENST00000603609 255 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AC009220.3-201ENST00000604318 586 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AC105148.1-201ENST00000604961 409 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AC055876.5-201ENST00000605667 259 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC188H7C350 MIR6830-201ENST00000636015 70 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC188H7C350 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC188H7C350 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC188H7C350 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC188H7C350 AP002907.1-201ENST00000606361 1430 ntBASIC3.77□□□□□ -1.81
CCDC188H7C350 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC188H7C350 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC188H7C350 OR5BR1P-201ENST00000524992 1330 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC004925.1-201ENST00000624256 2706 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC188H7C350 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CCDC188H7C350 RNU1-75P-201ENST00000347264 129 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 RN7SKP227-201ENST00000364445 330 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 SNORD116.1-201ENST00000365628 92 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 Y_RNA.408-201ENST00000383987 102 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 RNU6-213P-201ENST00000384051 104 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 U3.29-201ENST00000391296 212 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC188H7C350 AL450338.1-201ENST00000407987 512 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 RAD23BP2-201ENST00000416003 1207 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 TOMM22P1-201ENST00000418578 312 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 ATP5F1P1-201ENST00000433775 569 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 BX679664.1-201ENST00000434429 253 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC188H7C350 AL606517.1-201ENST00000446914 387 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms