Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC022493.1-201ENST00000492984 337 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 OR5BM1P-201ENST00000512021 366 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC093853.1-201ENST00000515689 483 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 IGKV2-36-201ENST00000519999 223 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 OR10V3P-201ENST00000525712 725 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC103843.2-201ENST00000530523 682 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC068831.4-201ENST00000556118 109 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 MIR4489-201ENST00000578869 62 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 ZNF861P-201ENST00000588126 639 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AL356280.1-201ENST00000603614 379 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 BNIP3P7-201ENST00000605641 516 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 U3.45-201ENST00000607547 219 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC090912.3-201ENST00000609775 533 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 HMGB1P24-202ENST00000615653 685 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC010435.1-201ENST00000623353 1177 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC012640.5-201ENST00000623897 319 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 AC068880.5-201ENST00000624331 290 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 MIR203B-201ENST00000636080 86 ntBASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CHKB-CPT1BH3BT56 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC009812.4-201ENST00000569134 1805 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL359893.1-201ENST00000447628 1580 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL109809.4-201ENST00000603520 2185 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 FRG1BP-201ENST00000278882 761 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 SNORD67-201ENST00000390833 111 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 RNU6-837P-201ENST00000391056 108 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 OR6C69P-201ENST00000394268 893 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 PPIAP31-201ENST00000405422 495 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 CYCSP19-201ENST00000411715 316 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 ELOCP19-201ENST00000411919 318 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL356095.1-201ENST00000417217 199 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC009480.2-201ENST00000422916 432 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 TRGV7-201ENST00000427089 353 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 YY1P1-201ENST00000427625 668 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC023141.6-201ENST00000429418 337 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL445687.1-201ENST00000439946 251 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL139109.1-201ENST00000455491 297 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 RPS7P7-201ENST00000463499 571 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC090255.1-201ENST00000495779 349 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 FTH1P21-201ENST00000512179 511 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 PAICSP4-201ENST00000517543 1253 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 TRAV28-201ENST00000557548 323 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 RPS3AP23-202ENST00000574601 686 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 RN7SL703P-201ENST00000578485 302 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 HSPE1P7-201ENST00000604681 321 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 APOOP1-201ENST00000604695 592 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC008277.2-201ENST00000605196 797 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC135178.6-201ENST00000605314 398 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 AC133644.2-201ENST00000608142 540 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 FAM25E-202ENST00000608562 189 ntBASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.47□□□□□ -2.17
CHKB-CPT1BH3BT56 VN1R7P-201ENST00000619242 903 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms