Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RPL21P109-201ENST00000422213 475 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 DPRXP1-201ENST00000426312 460 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 RPL21P66-201ENST00000426566 466 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 SLC31A1P1-201ENST00000451221 567 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 RPL12P26-201ENST00000452430 487 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 RPS24P6-201ENST00000452670 400 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 UBDP1-202ENST00000457888 382 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 RPL21P104-201ENST00000464143 478 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 RPS4XP13-201ENST00000483219 789 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 TRBV12-2-201ENST00000489763 344 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 HMGB1P22-201ENST00000505315 124 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AC093331.1-201ENST00000521474 169 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AC090502.2-201ENST00000549267 280 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AC010198.2-201ENST00000550612 259 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AL163642.2-201ENST00000604722 1019 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 U3.45-201ENST00000607547 219 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AL590282.1-201ENST00000610379 1136 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 PART1_2.1-201ENST00000612397 250 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AC104763.3-201ENST00000613765 618 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AL158163.2-201ENST00000619110 700 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 AC006963.1-201ENST00000624003 1052 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 Z99496.1-201ENST00000469424 1477 ntBASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.38□□□□□ -1.87
NPIPA2E9PIF3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 RNU6-989P-201ENST00000362756 107 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 RNA5SP51-201ENST00000364750 119 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 SNORD116-12-201ENST00000384468 92 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 RNU2-71P-201ENST00000411395 189 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC092634.6-201ENST00000418558 192 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AL662791.1-201ENST00000441992 928 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC006480.1-201ENST00000449887 378 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC104164.3-201ENST00000467363 1258 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC069528.1-202ENST00000482888 637 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 VPS26AP1-201ENST00000483197 979 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC106707.2-201ENST00000484182 374 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC113420.1-201ENST00000507903 571 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 RAC1P2-201ENST00000511164 579 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 RN7SKP209-201ENST00000516888 304 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 RPL12P22-201ENST00000519073 490 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AP001207.2-201ENST00000519490 539 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 CCNG2P1-201ENST00000549521 1000 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 SULT1C2P1-202ENST00000562418 459 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 AC091057.3-201ENST00000602684 733 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 BRDTP1-201ENST00000605735 677 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 MIR486-1-201ENST00000612171 68 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 MTND2P41-201ENST00000637599 773 ntBASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NPIPA2E9PIF3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.36□□□□□ -1.87
NPIPA2E9PIF3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms