Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 MIR422A-201ENST00000362286 90 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 DEFA7P-201ENST00000382676 285 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 RNVU1-14-201ENST00000384770 164 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AL355379.1-201ENST00000405542 640 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AL138885.1-201ENST00000405921 675 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 SSR1P1-201ENST00000407630 814 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 HMGN2P30-201ENST00000423237 256 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 RPS29P6-201ENST00000438196 145 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 RAB28P3-201ENST00000448325 597 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 NIPA2P5-201ENST00000452282 464 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC034236.1-201ENST00000469891 373 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 KC877373.1-201ENST00000479066 408 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 SCARNA13-201ENST00000516672 275 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC091564.4-201ENST00000533934 2194 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 NBEAP1-201ENST00000554452 979 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC093536.2-201ENST00000565257 1406 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC005412.1-201ENST00000580812 1049 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 RPL23AP78-201ENST00000599928 470 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC084373.1-201ENST00000603311 235 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC008962.1-201ENST00000605729 304 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AC011890.2-201ENST00000613393 294 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 AP004607.9-201ENST00000618202 316 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 SAGE4P-201ENST00000442271 3381 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 GABRG2-229ENST00000641017 3628 ntBASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AC092593.1-201ENST00000515413 1815 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 MIR181A2-201ENST00000384863 110 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 RPS4XP7-201ENST00000406274 780 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 SNORA11C-201ENST00000408532 129 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 RPL7P8-201ENST00000411964 730 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AJ239321.1-201ENST00000424255 564 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 SNRPEP4-201ENST00000435815 279 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 HMGB1P5-202ENST00000451497 985 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AL513343.1-201ENST00000451818 792 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 RPL37P3-201ENST00000456825 293 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 HMGB1P25-201ENST00000468402 607 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AL024509.2-201ENST00000493462 493 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 DYNLL1P6-201ENST00000503440 264 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 RNA5SP468-201ENST00000516782 93 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 RN7SKP57-201ENST00000517248 293 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AC090136.1-201ENST00000520009 240 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 OR4R1P-201ENST00000529879 463 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 ZNF861P-201ENST00000588126 639 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AC008687.2-201ENST00000597865 520 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 YPEL5P2-201ENST00000605553 359 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AC012557.1-201ENST00000607115 611 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AL161734.1-201ENST00000609720 557 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AC008083.4-201ENST00000615076 444 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AL355493.4-201ENST00000618530 292 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AC103798.2-201ENST00000624292 632 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 CR392039.4-201ENST00000624968 501 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AC009501.3-201ENST00000605001 1352 ntBASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV30A0A087WSZ9 AL122126.1-201ENST00000546905 1318 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 MTCO1P24-201ENST00000515438 1558 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 MIR6073-201ENST00000352083 89 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 MIR320B1-201ENST00000390209 79 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 SEPT7P2-202ENST00000398921 823 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AC092447.6-201ENST00000414578 210 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AL389915.1-201ENST00000422463 466 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AL512649.1-201ENST00000428997 581 ntBASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAV30A0A087WSZ9 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms