Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 NMD3P1-201ENST00000439704 1488 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 DCAF13P1-201ENST00000495256 1330 ntBASIC4.15□□□□□ -1.75
SNX9Q9Y5X1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC005539.1-201ENST00000443768 1479 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 RNU6-1066P-201ENST00000363573 105 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AL133264.1-201ENST00000407157 562 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 RN7SKP159-201ENST00000410657 292 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 FCF1P2-201ENST00000415284 583 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AL050321.1-201ENST00000432363 400 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 Z74696.2-201ENST00000436514 498 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AL117351.1-201ENST00000438864 766 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 MTCYBP34-201ENST00000439552 670 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 RPS17P13-201ENST00000448974 407 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 SNRPGP5-201ENST00000456003 220 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 USP9YP5-201ENST00000511770 630 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC026726.1-201ENST00000512859 601 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC117532.1-201ENST00000514638 323 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC146944.4-201ENST00000602697 718 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC091488.1-201ENST00000604239 660 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC009220.3-201ENST00000604318 586 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 MKKS-204ENST00000639674 192 ntBASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SNX9Q9Y5X1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 DBF4P1-201ENST00000412976 1892 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 Y_RNA.311-201ENST00000365068 96 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 U1.1-201ENST00000384101 164 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 SNORA70E-201ENST00000384492 135 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 Z98941.1-201ENST00000407764 100 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 SEPT2P1-201ENST00000419651 180 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC019178.2-201ENST00000423595 505 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC096638.2-201ENST00000434965 711 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 RPS26P40-201ENST00000435209 294 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 THAP5P1-201ENST00000439089 262 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AL034418.1-201ENST00000448675 860 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 NF1P3-201ENST00000457709 450 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 RPL37P6-202ENST00000464216 403 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC093853.1-201ENST00000515689 483 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC022695.1-201ENST00000522089 237 ntBASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.13□□□□□ -1.75
SNX9Q9Y5X1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms