Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 USP9YP31-201ENST00000431405 881 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 snoU109.4-201ENST00000458953 143 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AC013828.1-201ENST00000481845 158 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 RPS26P15-201ENST00000488067 348 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 RPL23AP55-201ENST00000498163 452 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 RN7SKP244-201ENST00000516513 307 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 SCARNA14-201ENST00000516903 136 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 GTF2IP22-201ENST00000554443 182 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 MTND1P8-201ENST00000571424 950 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 RPL23AP92-201ENST00000603609 255 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 ELOCP35-201ENST00000604289 336 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AC092954.1-201ENST00000609121 445 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AL157392.4-201ENST00000609756 345 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 AP005901.5-201ENST00000545779 1796 ntBASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHGA1Q9Y5H4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC244517.1-201ENST00000606030 2086 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 Y_RNA.472-201ENST00000384322 102 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 MIR506-201ENST00000384998 124 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AL136133.1-201ENST00000413694 376 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC092634.6-201ENST00000418558 192 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 FNDC3CP-201ENST00000420795 1155 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AL159169.1-201ENST00000421119 127 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AL035410.1-201ENST00000427409 427 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 SEPT7P5-201ENST00000434048 306 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC127537.2-201ENST00000439258 465 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC093155.1-201ENST00000440164 826 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 DUXAP8-207ENST00000456786 622 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 PABPC1P3-201ENST00000469174 459 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC108078.3-201ENST00000502633 489 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC113347.3-201ENST00000509113 148 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC087369.1-201ENST00000520775 996 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 MTND3P13-201ENST00000574391 343 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 VN1R92P-201ENST00000598511 928 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AL163642.2-201ENST00000604722 1019 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 VIS1.1-201ENST00000610517 203 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 DUXAP10-204ENST00000612052 616 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AL442067.2-201ENST00000614033 363 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC008083.4-201ENST00000615076 444 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AL158163.2-201ENST00000619110 700 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 NUP58P1-201ENST00000502546 1738 ntBASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHGA1Q9Y5H4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC018555.1-201ENST00000567548 1980 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms