Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 GNG5P1-201ENST00000255500 204 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 UBE2V1P10-201ENST00000414685 269 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 BX510359.2-201ENST00000417920 305 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 RPL36AP36-201ENST00000418616 301 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 E2F6P2-201ENST00000420708 748 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 ISCA1P1-201ENST00000426679 387 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC068287.1-201ENST00000430283 295 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC009961.2-201ENST00000435771 251 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 MTATP6P13-201ENST00000438531 667 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 CBX1P1-201ENST00000440184 427 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 RPL7AP61-201ENST00000443410 636 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 UBDP1-202ENST00000457888 382 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 ENPP7P9-201ENST00000514456 627 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 RNU6-430P-201ENST00000517078 107 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 RNU4-60P-201ENST00000517239 135 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 DEFB108A-201ENST00000530110 222 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC027807.1-201ENST00000559921 996 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC209154.1-201ENST00000582156 337 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC018695.5-201ENST00000605872 315 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC011816.2-201ENST00000607089 556 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC108747.1-201ENST00000609508 535 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AL590099.1-201ENST00000615276 138 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR8069-1-201ENST00000616627 86 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 U4.5-201ENST00000617137 123 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 AC002550.2-201ENST00000621246 394 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR8069-2-201ENST00000621412 86 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR6715B-201ENST00000637172 77 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 MTND5P33-201ENST00000571250 1450 ntBASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHGA3Q9Y5H0 OR14L1P-202ENST00000641545 3009 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 RNY4P34-201ENST00000364779 95 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 Y_RNA.516-201ENST00000384541 124 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 MTND1P21-201ENST00000412991 285 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 PIGFP2-201ENST00000421400 651 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 COX6CP13-201ENST00000428703 226 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC093899.1-201ENST00000457984 376 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC010326.1-201ENST00000462726 602 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 MTND1P3-201ENST00000484956 952 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AL139099.1-201ENST00000497398 403 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC010460.1-201ENST00000507087 466 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC010493.1-201ENST00000513479 292 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AP000907.2-201ENST00000530827 353 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AL391840.1-201ENST00000571144 367 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AL121834.1-201ENST00000572284 509 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 MIR3913-1-201ENST00000577744 102 ntBASIC4.72□□□□□ -1.65
PCDHGA3Q9Y5H0 RN7SL690P-201ENST00000582087 240 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms