Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 Y_RNA.350-201ENST00000365409 98 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 MIR1252-201ENST00000408861 65 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 PGBD4P6-201ENST00000421501 610 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 MRPS18CP6-201ENST00000423587 223 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 RPS15AP10-201ENST00000432472 382 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 AC096775.1-201ENST00000437724 448 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 AL359672.1-201ENST00000442302 409 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 FABP5P13-201ENST00000452144 328 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 CYCSP34-201ENST00000458172 304 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 AC007998.1-201ENST00000474156 672 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 Y_RNA.680-201ENST00000516441 93 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 HSBP1P1-201ENST00000555205 166 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 RPA2P1-201ENST00000556557 721 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 AC006254.3-201ENST00000603353 884 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 AC015967.1-201ENST00000619893 476 ntBASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RNA5SP284-201ENST00000384547 118 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RPL21P1-201ENST00000399532 476 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RNA5SP156-201ENST00000410250 110 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 UBE2FP1-201ENST00000416536 447 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 HMGB1P9-201ENST00000429856 646 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RPL21P2-201ENST00000440049 481 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AC010655.1-201ENST00000449336 292 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AC002553.3-201ENST00000453002 341 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-1132P-201ENST00000459214 107 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RN7SKP67-201ENST00000515905 235 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 SNORD46.2-201ENST00000516021 102 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AC123786.2-201ENST00000603459 275 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AC008555.7-201ENST00000605008 583 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 AL359547.2-201ENST00000615810 418 ntBASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
PCDHB11Q9Y5F2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB11Q9Y5F2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB11Q9Y5F2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.96□□□□□ -1.45
PCDHB11Q9Y5F2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB11Q9Y5F2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB11Q9Y5F2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 RNU1-134P-201ENST00000362935 165 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 RNU6-214P-201ENST00000384130 107 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 MIR130B-202ENST00000385018 82 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 RNU11-4P-201ENST00000391149 133 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC096664.2-201ENST00000411843 406 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 CHEK2P5-201ENST00000423877 246 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 RHOT1P3-201ENST00000436571 331 ntBASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB11Q9Y5F2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms