Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 RAB9AP3-201ENST00000412737 573 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 MRPL50P2-201ENST00000416821 482 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 UBE2D3P2-201ENST00000424409 445 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC007389.2-201ENST00000434630 306 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 TRIM60P18-201ENST00000441518 828 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 RPL23AP16-201ENST00000441715 421 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 RNFT1P2-201ENST00000443064 757 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 RAB9AP1-201ENST00000449393 573 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC073387.1-201ENST00000453261 709 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 RPL23AP31-201ENST00000456160 467 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 RPL21P47-201ENST00000483696 477 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 RNU1-45P-201ENST00000517191 141 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 SCARNA20.6-201ENST00000517251 106 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 SNRPGP16-201ENST00000533275 226 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 BNIP3P5-201ENST00000562290 498 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC023824.3-201ENST00000569003 562 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 OR4H6P-202ENST00000603819 340 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC009948.4-201ENST00000604692 675 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC018816.2-201ENST00000621460 353 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 SGO1P1-201ENST00000603525 1447 ntBASIC2.98□□□□□ -1.93
RHBDD3Q9Y3P4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 OR5H2-201ENST00000355273 945 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC025750.1-201ENST00000399891 379 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 SYF2P2-201ENST00000417620 583 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 FAR1P1-201ENST00000427163 934 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 CYCSP4-201ENST00000429682 331 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AL353705.1-201ENST00000433468 480 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 RPL23AP22-201ENST00000437556 453 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AL691517.1-201ENST00000440833 1235 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 snoU109.4-201ENST00000458953 143 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 RPS4XP6-201ENST00000477670 797 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC092185.1-201ENST00000491371 97 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 TRMT10BP1-201ENST00000519377 943 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 OR4H12P-201ENST00000556269 907 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AP005205.1-201ENST00000563503 508 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC009570.1-201ENST00000609599 745 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC245100.7-201ENST00000609678 442 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 MIR7851-201ENST00000610611 160 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AL138880.2-201ENST00000616214 239 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 AC032011.1-201ENST00000611703 1549 ntBASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.97□□□□□ -1.93
RHBDD3Q9Y3P4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
RHBDD3Q9Y3P4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
RHBDD3Q9Y3P4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 AL645937.1-201ENST00000641739 1652 ntBASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 RNU6-1074P-201ENST00000383995 104 ntBASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 MIR554-201ENST00000384874 96 ntBASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 MIR16-1-201ENST00000385271 89 ntBASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 AC093578.1-201ENST00000415219 368 ntBASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 RPL36AP36-201ENST00000418616 301 ntBASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 AL035410.1-201ENST00000427409 427 ntBASIC2.96□□□□□ -1.94
RHBDD3Q9Y3P4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms