Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
MRPS28Q9Y2Q9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
MRPS28Q9Y2Q9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MRPS28Q9Y2Q9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
MRPS28Q9Y2Q9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
MRPS28Q9Y2Q9 AC117529.2-201ENST00000512159 2068 ntBASIC3.5□□□□□ -1.85
MRPS28Q9Y2Q9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.5□□□□□ -1.85
MRPS28Q9Y2Q9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MRPS28Q9Y2Q9 AC107081.3-201ENST00000612715 2034 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 MFSD8-216ENST00000641147 4009 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 IPO8P1-201ENST00000455509 3109 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 NMD3P1-201ENST00000439704 1488 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 LINC00561-201ENST00000565815 2738 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC116667.1-201ENST00000604855 2072 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RNU6-374P-201ENST00000364146 108 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RNU6-660P-201ENST00000364566 109 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 Y_RNA.302-201ENST00000364997 102 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RNU6-444P-201ENST00000383988 108 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RNU6-921P-201ENST00000384361 107 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RNU1-89P-201ENST00000384592 164 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 Y_RNA.553-201ENST00000384670 102 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 MIR1251-201ENST00000408552 70 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC016397.1-201ENST00000412463 242 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AL807761.1-201ENST00000417622 171 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AL953862.1-201ENST00000423016 168 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 CYCSP46-201ENST00000423569 204 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 SDCBPP2-201ENST00000424643 885 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 MTCYBP39-201ENST00000437562 491 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AF228730.2-201ENST00000438784 848 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 MTCO1P19-201ENST00000443487 500 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 EPS15P1-201ENST00000448836 336 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 FABP3P2-201ENST00000453169 399 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 ARPC3P2-201ENST00000457786 533 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 HMGB3P30-201ENST00000457863 606 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RPL23AP24-201ENST00000458203 385 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RPL30P9-201ENST00000465586 330 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RN7SL271P-201ENST00000487601 295 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 CEACAMP10-202ENST00000495431 496 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC008958.1-201ENST00000511047 682 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC093840.1-201ENST00000511599 336 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RNU6-583P-201ENST00000516012 92 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC008802.1-201ENST00000519121 791 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 DEFB131D-201ENST00000526803 184 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC087276.1-201ENST00000529659 480 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC090502.2-201ENST00000549267 280 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 PSMB7P1-201ENST00000556349 514 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 SULT1C2P1-202ENST00000562418 459 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AL360157.1-201ENST00000565962 87 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC009101.1-201ENST00000568135 242 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC012213.3-201ENST00000577199 777 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 MIR4644-201ENST00000579929 84 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC025165.5-201ENST00000602802 578 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC004987.4-201ENST00000603383 338 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 RNA5SP108-201ENST00000605921 117 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC092354.1-201ENST00000606057 376 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AL391497.1-201ENST00000608671 547 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC103591.3-201ENST00000608684 209 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 MIR486-1-201ENST00000612171 68 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 AP001486.2-201ENST00000561652 5113 ntBASIC3.49□□□□□ -1.85
MRPS28Q9Y2Q9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms