Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.71□□□□□ -1.33
ZC3H4Q9UPT8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ZC3H4Q9UPT8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ZC3H4Q9UPT8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ZC3H4Q9UPT8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
ZC3H4Q9UPT8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
ZC3H4Q9UPT8 AC097714.1-201ENST00000511272 1647 ntBASIC6.71□□□□□ -1.33
ZC3H4Q9UPT8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 PHKBP1-201ENST00000450951 1951 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 RNU5A-8P-201ENST00000364102 114 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 U3.12-201ENST00000364498 214 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 Y_RNA.527-201ENST00000384573 102 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 MT-TG-201ENST00000387429 68 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AL133482.1-201ENST00000415988 498 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC015977.1-201ENST00000418887 292 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 UBE2V1P13-201ENST00000436983 439 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 FTH1P1-201ENST00000437933 532 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 RNU7-180P-201ENST00000459240 63 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 HMGB1P30-201ENST00000492455 606 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 RNU6-976P-201ENST00000516086 111 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC109635.4-202ENST00000531666 412 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC090615.1-201ENST00000577519 154 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC069061.3-201ENST00000582254 823 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 NUTF2P8-201ENST00000604593 363 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AL161616.1-201ENST00000611867 286 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AC083809.1-201ENST00000615051 472 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 AL445437.1-201ENST00000623157 3087 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 U6.114-201ENST00000636407 96 ntBASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ZC3H4Q9UPT8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC007114.2-201ENST00000576014 4281 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 ZNF807-201ENST00000328088 1707 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 SNORD113-7-201ENST00000363762 77 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 SNORA70.2-201ENST00000364506 135 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC007562.1-201ENST00000421819 517 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 MED13P1-201ENST00000428342 171 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 FABP5P14-201ENST00000437273 393 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC079922.1-201ENST00000443291 359 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AL162395.1-201ENST00000457882 422 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 U8.20-201ENST00000459445 131 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC004801.2-202ENST00000463559 283 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 RN7SL459P-201ENST00000481078 302 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC058823.1-201ENST00000485315 474 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC008897.1-201ENST00000494006 347 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 FTH1P21-201ENST00000512179 511 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 HMGB1P41-201ENST00000520234 440 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 IMMP1LP2-201ENST00000552954 492 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 SETP2-201ENST00000553886 926 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 MIR4775-201ENST00000581168 75 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 MIR4424-201ENST00000585257 86 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 AC243654.2-201ENST00000612843 443 ntBASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.7□□□□□ -1.34
ZC3H4Q9UPT8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC015799.1-201ENST00000622996 3122 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC140134.1-201ENST00000511830 3544 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms