Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 MIR589-201ENST00000385238 99 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 RNU6-1068P-201ENST00000410958 103 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 RNU6-373P-201ENST00000411247 98 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 EI24P4-201ENST00000423683 1078 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 PSMA6P3-201ENST00000428242 164 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 RPL23AP30-201ENST00000432419 501 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 RPS15AP9-201ENST00000439856 381 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 RN7SL727P-201ENST00000482164 296 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC024558.1-201ENST00000505008 528 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 FGF7P4-201ENST00000509595 295 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 RNA5SP401-201ENST00000515920 127 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC090572.1-201ENST00000519251 160 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC024224.1-201ENST00000538284 609 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC024940.3-201ENST00000538551 316 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 MIR3176-201ENST00000582210 90 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC022467.1-201ENST00000614738 749 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 BX005214.3-202ENST00000619809 325 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC112204.3-201ENST00000623822 332 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AC079597.1-201ENST00000624306 508 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 LINC01355-201ENST00000566551 5444 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AL592148.3-201ENST00000608771 2646 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 AL136964.1-201ENST00000622038 2990 ntBASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
BRPF3Q9ULD4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC091046.3-201ENST00000631455 1574 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 RNU6-223P-201ENST00000362830 107 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 U3.3-201ENST00000362986 216 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 Y_RNA.234-201ENST00000364409 97 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 RN7SKP269-201ENST00000365545 319 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 Y_RNA.548-201ENST00000384656 105 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 MIR105-1-201ENST00000385222 81 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 RN7SKP235-201ENST00000410662 305 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC012065.2-201ENST00000421295 375 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 RGS17P1-201ENST00000423358 553 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC114495.1-201ENST00000441274 436 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 RPL7P52-201ENST00000449200 742 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 SLC25A18P1-201ENST00000449385 454 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC079168.1-201ENST00000458741 345 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 snoU13.8-201ENST00000458890 104 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC063943.1-201ENST00000465434 453 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 RPS26P39-201ENST00000469206 341 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 HMGB1P21-201ENST00000502313 581 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 Y_RNA.701-201ENST00000516812 110 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 RNA5SP337-201ENST00000517007 109 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 HMGB1P6-201ENST00000569046 646 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC090615.1-201ENST00000577519 154 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 MIR3146-201ENST00000580367 79 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 BX323046.1-201ENST00000610145 535 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 uc_338.18-201ENST00000615451 175 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 MIR8069-1-201ENST00000616627 86 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AC126177.8-201ENST00000618339 1015 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 MIR6886-201ENST00000619864 61 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 MIR8069-2-201ENST00000621412 86 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms