Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL136097.1-201ENST00000456945 913 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 HMGB3P15-201ENST00000507326 574 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC021146.1-201ENST00000511202 716 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC008837.1-201ENST00000511513 412 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 RNA5SP208-201ENST00000516156 78 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 RNA5SP468-201ENST00000516782 93 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 RANP9-201ENST00000519957 271 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 SYF2P1-201ENST00000550658 413 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC023825.1-201ENST00000566704 1030 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 ELOCP35-201ENST00000604289 336 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC124016.2-201ENST00000610058 665 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 VIS1.1-201ENST00000610517 203 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 MIR7851-201ENST00000610611 160 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 U7.8-201ENST00000619968 63 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC007275.1-201ENST00000621243 671 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC079684.1-201ENST00000621405 437 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AP003476.1-201ENST00000623984 516 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AC010733.2-201ENST00000589496 5702 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 MTND4P34-201ENST00000572715 1371 ntBASIC3.61□□□□□ -1.83
SPASTQ9UBP0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SPASTQ9UBP0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 RNU6-50P-201ENST00000362356 103 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 RNU6-492P-201ENST00000363035 104 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 SUGT1P1-201ENST00000379514 476 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 SOD2P1-201ENST00000396543 562 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 RPL30P2-201ENST00000414021 291 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC092634.6-201ENST00000418558 192 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 ARF4P2-201ENST00000430209 526 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC010655.1-201ENST00000449336 292 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 RNU7-170P-201ENST00000459303 61 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC104629.1-201ENST00000494226 508 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 WBP1LP4-201ENST00000505043 344 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 RN7SKP209-201ENST00000516888 304 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC068339.2-201ENST00000534395 618 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC012468.1-201ENST00000604888 430 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AL592148.2-201ENST00000612210 372 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC008083.4-201ENST00000615076 444 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AL157770.1-201ENST00000623049 439 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 AL392088.2-201ENST00000637607 285 ntBASIC3.6□□□□□ -1.83
SPASTQ9UBP0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SPASTQ9UBP0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SPASTQ9UBP0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SPASTQ9UBP0 ANKRD36P1-201ENST00000344424 659 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 RNA5SP50-201ENST00000363731 107 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SPASTQ9UBP0 RNA5SP129-201ENST00000410276 118 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 AC245054.1-201ENST00000420944 258 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 MTCO3P1-205ENST00000422088 832 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 PTP4A1P7-201ENST00000423476 514 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.59□□□□□ -1.83
SPASTQ9UBP0 CYCSP4-201ENST00000429682 331 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 SETP5-201ENST00000437270 562 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.59□□□□□ -1.83
SPASTQ9UBP0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.59□□□□□ -1.83
SPASTQ9UBP0 AC104978.1-201ENST00000449387 391 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 HMGB1P15-201ENST00000453854 435 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 snoU13.4-201ENST00000458916 104 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 snoU109.4-201ENST00000458953 143 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 PLGLA-201ENST00000465668 449 ntBASIC3.59□□□□□ -1.83
SPASTQ9UBP0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.59□□□□□ -1.83
SPASTQ9UBP0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.59□□□□□ -1.83
SPASTQ9UBP0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms