Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SNORD66.1-201ENST00000391230 76 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 MIR1302-8-201ENST00000408342 128 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 RN7SKP235-201ENST00000410662 305 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AL513174.1-201ENST00000423182 629 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AL157831.1-201ENST00000426134 473 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 NANOGP6-201ENST00000429190 847 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 Z95327.1-201ENST00000446082 482 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 NUTF2P3-201ENST00000448540 384 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AL451050.1-201ENST00000450126 415 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC097262.1-201ENST00000452559 548 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC133473.1-201ENST00000455173 299 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 RPS20P32-201ENST00000456044 356 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 RPL23AP2-201ENST00000471227 466 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC104563.1-201ENST00000476147 376 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 HMGB1P36-201ENST00000487709 576 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 RN7SL691P-201ENST00000494487 301 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC112198.1-201ENST00000505369 1220 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC034159.1-201ENST00000513885 583 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 SNORA31.9-201ENST00000516429 84 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 IGLV3-26-201ENST00000520756 302 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 CYCSP29-201ENST00000533731 318 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC090615.1-201ENST00000577519 154 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC090616.5-202ENST00000582111 297 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 WISP1-OT1-201ENST00000602893 642 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC013444.2-201ENST00000603317 787 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC097468.3-201ENST00000607956 456 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AL392048.1-201ENST00000613946 534 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 MIR3653-201ENST00000625572 110 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 CRYM-AS1-204ENST00000637983 556 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 CR383658.2-201ENST00000547576 1525 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 AC027287.1-201ENST00000553115 1453 ntBASIC4.05□□□□□ -1.76
HCN3Q9P1Z3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 RNU1-14P-201ENST00000362759 152 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 RNA5SP513-201ENST00000364648 118 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 SNORD51-201ENST00000384320 80 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 RPS3AP26-201ENST00000398259 784 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AL021407.1-201ENST00000404531 386 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC092447.6-201ENST00000414578 210 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC245052.5-201ENST00000416320 649 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AIMP1P1-201ENST00000418670 937 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AL512326.1-201ENST00000443050 721 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 Z83846.1-201ENST00000446798 265 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 snoU13.8-201ENST00000458890 104 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC091167.1-201ENST00000492017 396 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 DSTNP2-201ENST00000504533 515 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 Vault.1-201ENST00000516474 102 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 MRPL49P2-201ENST00000521066 465 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 OR5AP1P-201ENST00000529730 940 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC013828.2-201ENST00000532487 235 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC011260.1-201ENST00000578420 472 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC010620.1-201ENST00000601088 1102 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AC068790.5-201ENST00000602741 355 ntBASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HCN3Q9P1Z3 AL590392.1-201ENST00000604960 446 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms