Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AL391219.1-201ENST00000422570 483 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC245028.1-201ENST00000423259 256 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AL139415.2-201ENST00000431968 163 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 MTND4LP10-201ENST00000435146 291 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 NPM1P49-201ENST00000448027 714 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 PPIAP3-201ENST00000450588 505 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 MTND1P12-201ENST00000455231 147 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 snoU13.20-201ENST00000459180 104 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC022795.1-201ENST00000473808 480 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC055855.1-201ENST00000489563 579 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 DEFB109F-201ENST00000491870 277 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 RPS4XP18-201ENST00000495480 763 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 SAP18P1-201ENST00000512058 390 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC069307.1-201ENST00000602820 447 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC112230.1-201ENST00000604342 547 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC087783.2-201ENST00000605070 562 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 MIR98-201ENST00000606724 119 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC090527.3-201ENST00000619041 548 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC012150.2-201ENST00000621300 544 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC091953.2-201ENST00000623979 160 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC090229.1-201ENST00000590983 1609 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 AC108751.5-201ENST00000492880 1336 ntBASIC4.7□□□□□ -1.66
CCM2LQ9NUG4 NMD3P1-201ENST00000439704 1488 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 RNU5E-1-201ENST00000362477 120 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 SNORA73.1-201ENST00000363107 205 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 SNORA51.8-201ENST00000384234 132 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 RNU6-114P-201ENST00000384704 105 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AL356967.1-201ENST00000406305 431 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 CCNG1P1-201ENST00000406783 885 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 MIR1182-201ENST00000408363 97 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 MTND4LP11-201ENST00000422184 280 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 CHIAP3-201ENST00000423668 1133 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 FCF1P1-201ENST00000432690 571 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC104850.1-201ENST00000435940 476 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 USP9YP15-201ENST00000442391 422 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 MTCO2P29-201ENST00000465212 189 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 RN7SL481P-201ENST00000477764 299 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC010587.1-201ENST00000505809 469 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC021146.3-201ENST00000511911 260 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 RNU6-718P-201ENST00000516166 105 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC134698.4-201ENST00000523451 826 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AP001893.2-201ENST00000526949 202 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC092490.3-201ENST00000545370 572 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 SNORA59B-202ENST00000578183 701 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AL590282.1-201ENST00000610379 1136 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 MLECP1-201ENST00000615893 709 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 AC009268.2-201ENST00000621925 457 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 CYP4F35P-202ENST00000636121 390 ntBASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms