Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
KIAA1549Q9HCM3 AC243829.7-201ENST00000633081 225 ntBASIC2.43□□□□□ -2.02
KIAA1549Q9HCM3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.43□□□□□ -2.02
KIAA1549Q9HCM3 AL359693.1-201ENST00000614959 2407 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 RNA5SP68-201ENST00000363885 119 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 RNA5SP167-201ENST00000365461 116 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AL451074.5-201ENST00000415894 435 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC009963.1-201ENST00000417265 157 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC073069.1-201ENST00000428657 441 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC093716.1-201ENST00000435923 377 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 RPL7P59-201ENST00000447700 943 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 RNA5SP385-201ENST00000515947 110 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AP004242.1-201ENST00000533701 349 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 MIR4513-201ENST00000581077 86 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC099778.2-201ENST00000610904 211 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AF127577.6-201ENST00000623352 2191 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC000367.1-201ENST00000452711 1766 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 AC117529.2-201ENST00000512159 2068 ntBASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
KIAA1549Q9HCM3 RNA5SP126-201ENST00000365092 109 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 BTF3P9-201ENST00000418784 283 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 TRIAP1P1-201ENST00000427062 225 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 RN7SL429P-201ENST00000479090 223 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 RN7SL489P-201ENST00000486185 223 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 RN7SL327P-201ENST00000488659 223 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 MTCO1P30-201ENST00000515244 580 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AC100870.1-201ENST00000522035 505 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 MIR4635-201ENST00000583759 79 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 RN7SL853P-201ENST00000617250 223 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 MAPK10-322ENST00000641485 4530 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 ZNF90P1-201ENST00000480493 1951 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AL512633.1-201ENST00000399931 655 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 MTCO1P39-201ENST00000426148 480 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AC112220.1-201ENST00000434628 355 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 RPL31P50-201ENST00000471002 296 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AC006483.1-201ENST00000487308 313 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AC114781.4-201ENST00000513707 639 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 SNORA9.3-201ENST00000516383 129 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 MIR3124-201ENST00000582636 67 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 AC007687.1-201ENST00000602704 304 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 TAB3P1-202ENST00000452645 1634 ntBASIC2.41□□□□□ -2.02
KIAA1549Q9HCM3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 SNORA67.4-201ENST00000384688 142 ntBASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 YWHAZP7-201ENST00000436906 631 ntBASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 ELOCP31-201ENST00000540463 467 ntBASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 AL627309.6-201ENST00000606857 840 ntBASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
KIAA1549Q9HCM3 AL161431.1-201ENST00000618966 4205 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 MIR181A2-201ENST00000384863 110 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 MT-TP-201ENST00000387461 68 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 VN1R51P-201ENST00000411675 945 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 RPL36AP33-201ENST00000450395 310 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AC146507.1-201ENST00000468335 354 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AC078918.1-201ENST00000498515 228 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms