Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CBX8Q9HC52 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CBX8Q9HC52 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CBX8Q9HC52 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CBX8Q9HC52 Y_RNA.234-201ENST00000364409 97 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 RN7SKP292-201ENST00000365522 317 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 RPS7P15-201ENST00000415804 584 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC234779.1-201ENST00000425910 285 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 HMGB1P18-201ENST00000438801 619 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC073415.1-201ENST00000449240 153 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AL691482.1-201ENST00000453255 87 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AL445433.1-201ENST00000457507 257 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 RNU6-329P-201ENST00000459618 107 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 MRPS17P3-201ENST00000465453 385 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 snoU109.6-201ENST00000516831 118 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC012400.1-201ENST00000518452 381 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC090022.1-201ENST00000546569 311 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC015720.2-201ENST00000567709 334 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 RNF138P2-201ENST00000603490 592 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 LLPHP1-201ENST00000603571 367 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 AC004853.1-201ENST00000604902 698 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.66□□□□□ -1.5
CBX8Q9HC52 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CBX8Q9HC52 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CBX8Q9HC52 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CBX8Q9HC52 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CBX8Q9HC52 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AL138820.1-201ENST00000617901 5305 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CBX8Q9HC52 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 RNU6-1226P-201ENST00000384317 107 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AL356967.1-201ENST00000406305 431 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 RN7SKP235-201ENST00000410662 305 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC073136.2-201ENST00000417282 849 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 CHEK2P5-201ENST00000423877 246 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 CKS1BP6-201ENST00000424932 240 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 DUTP6-201ENST00000425573 462 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC137499.1-201ENST00000427602 88 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AL450023.3-201ENST00000440592 271 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC114495.1-201ENST00000441274 436 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 RPS17P2-201ENST00000461663 408 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 GMFBP1-201ENST00000467831 427 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC020890.1-201ENST00000491837 504 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC104057.1-201ENST00000515547 497 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 RNU4-49P-201ENST00000516080 140 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 SNORD27.1-201ENST00000516319 72 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 RNU6-941P-201ENST00000516346 108 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AL390726.5-202ENST00000564800 256 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC005668.1-201ENST00000571142 476 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 MIR1273E-201ENST00000581165 102 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 MIR3614-201ENST00000581261 86 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC105224.1-201ENST00000587055 421 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 RPSAP73-201ENST00000614820 330 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 uc_338.12-201ENST00000616344 181 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 AL596245.1-201ENST00000618994 362 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.65□□□□□ -1.5
CBX8Q9HC52 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.65□□□□□ -1.5
CBX8Q9HC52 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CBX8Q9HC52 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.65□□□□□ -1.51
CBX8Q9HC52 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.65□□□□□ -1.51
CBX8Q9HC52 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.65□□□□□ -1.51
CBX8Q9HC52 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CBX8Q9HC52 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CBX8Q9HC52 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CBX8Q9HC52 MTND5P3-201ENST00000438536 1800 ntBASIC5.64□□□□□ -1.51
CBX8Q9HC52 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.64□□□□□ -1.51
CBX8Q9HC52 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CBX8Q9HC52 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CBX8Q9HC52 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.64□□□□□ -1.51
CBX8Q9HC52 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CBX8Q9HC52 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.64□□□□□ -1.51
CBX8Q9HC52 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.64□□□□□ -1.51
CBX8Q9HC52 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CBX8Q9HC52 RNA5SP319-201ENST00000362768 119 ntBASIC5.64□□□□□ -1.51
CBX8Q9HC52 RNU6-738P-201ENST00000384531 106 ntBASIC5.64□□□□□ -1.51
CBX8Q9HC52 AC004987.3-201ENST00000413879 771 ntBASIC5.64□□□□□ -1.51
CBX8Q9HC52 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms