Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 MTCYBP37-201ENST00000510642 1133 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AP000790.1-201ENST00000528891 737 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 OR5B10P-201ENST00000532869 642 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AP000619.3-201ENST00000535634 1127 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC126177.3-201ENST00000551839 688 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 MTCO1P40-201ENST00000574371 625 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 GAS5-AS1-201ENST00000602767 694 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 VIS1.1-201ENST00000610517 203 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AL110115.1-201ENST00000614396 364 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 SNORD39.4-201ENST00000620099 78 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC127502.3-201ENST00000636170 1206 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 AC012442.3-202ENST00000636742 206 ntBASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC40Q9H9A6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.4□□□□□ -1.86
LRRC40Q9H9A6 Y_RNA.126-201ENST00000363382 111 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 RNU6-115P-201ENST00000364310 107 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 RNU6-712P-201ENST00000410558 100 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 BX842559.1-201ENST00000419615 532 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC104308.1-201ENST00000454621 333 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 RPS20P24-201ENST00000457473 361 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 RPS23P3-201ENST00000470993 430 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC108078.3-201ENST00000502633 489 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 APOOP4-201ENST00000513530 597 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC023632.4-201ENST00000517783 191 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 ZNF705CP-201ENST00000530515 889 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC015917.1-201ENST00000579654 510 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC008507.1-201ENST00000587506 734 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AL020997.2-201ENST00000602607 184 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AL356321.1-201ENST00000621360 228 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC095031.1-201ENST00000623685 672 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC010733.2-201ENST00000589496 5702 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.87
LRRC40Q9H9A6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 OR1L1-202ENST00000373686 1083 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 RPS7P13-201ENST00000413955 498 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 RPS29P4-201ENST00000414733 161 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 BX664727.1-201ENST00000416024 466 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 RPL23AP16-201ENST00000441715 421 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 OR51B8P-201ENST00000449892 769 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 RNU7-140P-201ENST00000459546 60 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 HMGN2P13-201ENST00000476476 274 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 VPS26AP1-201ENST00000483197 979 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC118282.2-201ENST00000508739 374 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC121161.1-201ENST00000510606 652 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 OR8K2P-201ENST00000524645 927 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC092474.3-201ENST00000603022 568 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms