Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC069157.1-201ENST00000421749 137 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC127537.2-201ENST00000439258 465 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 RPL23AP16-201ENST00000441715 421 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC097262.1-201ENST00000452559 548 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC010301.1-201ENST00000473936 355 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC020893.1-201ENST00000502452 580 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 MTCO2P9-201ENST00000503214 694 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 RPL12P22-201ENST00000519073 490 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AL136520.1-202ENST00000555494 763 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AL450489.1-201ENST00000612071 468 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC018755.4-201ENST00000619715 454 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 RNA5SP50-201ENST00000363731 107 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 SNORD82-201ENST00000365530 70 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 Z99755.1-201ENST00000414048 380 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 HMGN2P20-201ENST00000437531 273 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AL592437.1-201ENST00000443781 492 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC008264.1-201ENST00000447612 367 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AL050341.1-201ENST00000447743 313 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 MTCO3P2-201ENST00000457365 171 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 RPS20P24-201ENST00000457473 361 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC112198.1-201ENST00000505369 1220 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 IGHV3-76-201ENST00000522465 295 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 ARL2BPP5-201ENST00000523141 481 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC019227.1-201ENST00000526902 510 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AC067852.3-201ENST00000589177 561 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 RPL21P136-201ENST00000605378 396 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AL158211.2-201ENST00000607282 395 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 VN1R74P-201ENST00000613259 503 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 AL121594.5-201ENST00000631724 573 ntBASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
POLR1EQ9GZS1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RNU6-353P-201ENST00000364266 108 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RNU6-730P-201ENST00000383954 104 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL139098.1-201ENST00000407291 389 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RNU4-65P-201ENST00000410473 140 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RN7SKP27-201ENST00000410684 333 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL133384.1-201ENST00000412744 351 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC126124.2-201ENST00000413542 321 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RPL23AP82-202ENST00000427528 469 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL158053.1-201ENST00000441503 453 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RPS4XP2-201ENST00000458402 793 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RPL23AP44-201ENST00000482216 473 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RPL21P129-201ENST00000491732 478 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 ARL2BPP6-201ENST00000512757 439 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 PHBP14-201ENST00000512887 367 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 RNU6-334P-201ENST00000517072 102 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 IGKV2-26-201ENST00000518305 343 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL139174.1-201ENST00000531489 886 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms